RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MEIS1O00470 390 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 PEX10O60683 326 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 PTMAP06454 111 aaKnown RBP20.33■□□□□ 0.85
VIM-201ENST00000224237 STAT3P40763 770 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 PCNX4Q63HM2 1172 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 NSMFQ6X4W1 530 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 SLC30A10Q6XR72 485 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 CCDC47Q96A33 483 aaKnown RBP20.33■□□□□ 0.85
VIM-201ENST00000224237 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.85
VIM-201ENST00000224237 MXRA8Q9BRK3 442 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.85
VIM-201ENST00000224237 KLRC4O43908 158 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 GJA5P36382 358 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 ECM1Q16610 540 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 LRCH2Q5VUJ6 765 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 NCAPH2Q6IBW4 605 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 NIPA1Q7RTP0 329 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 MB21D1Q8N884 522 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 SLC5A5Q92911 643 aa20.33■□□□□ 0.84
VIM-201ENST00000224237 UNCXA6NJT0 531 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 RHOBTB3O94955 611 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 BCRP11274 1271 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 CDC25BP30305 580 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 MCM6Q14566 821 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 KMT5BQ4FZB7 885 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 MRFAP1L1Q96HT8 127 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 GTPBP4Q9BZE4 634 aaKnown RBP20.32■□□□□ 0.84
VIM-201ENST00000224237 ACAD9Q9H845 621 aa20.32■□□□□ 0.84
VIM-201ENST00000224237 PPP1R3GB7ZBB8 358 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 PSMD10O75832 226 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 RPA1P27694 616 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 ASIC1P78348 528 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 PPP2R5CQ13362 524 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 PLS1Q14651 629 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 LBX2Q6XYB7 198 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 SMYD4Q8IYR2 804 aaPredicted RBP20.31■□□□□ 0.84
VIM-201ENST00000224237 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 HSD3B7Q9H2F3 369 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 KIAA1024Q9UPX6 916 aa20.31■□□□□ 0.84
VIM-201ENST00000224237 POTEB3A0JP26 581 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 CD44P16070 742 aaKnown RBP20.3■□□□□ 0.84
VIM-201ENST00000224237 BAATQ14032 418 aaPredicted RBP20.3■□□□□ 0.84
VIM-201ENST00000224237 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
VIM-201ENST00000224237 PGM5Q15124 567 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 POTEBQ6S5H4 581 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 OTOP1Q7RTM1 612 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 AGTPBP1Q9UPW5 1226 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 GOLGA6L6A8MZA4 724 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 GAS7O60861 476 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 MED24O75448 989 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 ITGB5P18084 799 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 IRX3P78415 501 aaPredicted RBP20.3■□□□□ 0.84
VIM-201ENST00000224237 MOGSQ13724 837 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 CNNM4Q6P4Q7 775 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 CATSPER3Q86XQ3 398 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 KCTD17Q8N5Z5 321 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 IL31RAQ8NI17 732 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 PURBQ96QR8 312 aaKnown RBP20.3■□□□□ 0.84
VIM-201ENST00000224237 EXOC1Q9NV70 894 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 NFE2L3Q9Y4A8 694 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 SYNRGQ9UMZ2 1314 aa20.3■□□□□ 0.84
VIM-201ENST00000224237 ARP10275 920 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 EIF2AK2P19525 551 aaKnown RBP20.29■□□□□ 0.84
VIM-201ENST00000224237 ARHGEF16Q5VV41 709 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 KLHL10Q6JEL2 608 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 XRRA1Q6P2D8 792 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
VIM-201ENST00000224237 TRMT44Q8IYL2 757 aaKnown RBP20.29■□□□□ 0.84
VIM-201ENST00000224237 CHST13Q8NET6 341 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 POLR3CQ9BUI4 534 aaPredicted RBP20.29■□□□□ 0.84
VIM-201ENST00000224237 FANCLQ9NW38 375 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 UBIAD1Q9Y5Z9 338 aa20.29■□□□□ 0.84
VIM-201ENST00000224237 MYMKA6NI61 221 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 IPO5O00410 1097 aaKnown RBP20.28■□□□□ 0.84
VIM-201ENST00000224237 MRPS9P82933 396 aaKnown RBP20.28■□□□□ 0.84
VIM-201ENST00000224237 GIMAP8Q8ND71 665 aaPredicted RBP20.28■□□□□ 0.84
VIM-201ENST00000224237 SLC10A4Q96EP9 437 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 RIT2Q99578 217 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 TEKT3Q9BXF9 490 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 JADE2Q9NQC1 790 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 RRAGDQ9NQL2 400 aaPredicted RBP20.28■□□□□ 0.84
VIM-201ENST00000224237 KCNH7Q9NS40 1196 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 GDAQ9Y2T3 454 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 PVALEFA0A1B0GWK0 134 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 ESPNB1AK53 854 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 SPATA31C1P0DKV0 1188 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 PDE4DQ08499 809 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 PABPC4Q13310 644 aaKnown RBP eCLIP20.28■□□□□ 0.841e-7■■■□□ 16.8
VIM-201ENST00000224237 STIM1Q13586 685 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 UNC13DQ70J99 1090 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 MED15Q96RN5 788 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 EIF2AK1Q9BQI3 630 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms