RNA–Protein interactions for RNA: ENST00000639544.1

KCNMA1-264, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-264ENST00000639544 SP2Q02086 613 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 ARIH2O95376 493 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 SPIRE1Q08AE8 756 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 TRIM32Q13049 653 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 NBR1Q14596 966 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 PIK3AP1Q6ZUJ8 805 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
KCNMA1-264ENST00000639544 NR3C2P08235 984 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 CYBAP13498 195 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 KCTD2Q14681 263 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 INF2Q27J81 1249 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 XRRA1Q6P2D8 792 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 TNPO2O14787 897 aaKnown RBP11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 CTAGE5O15320 804 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 TDP2O95551 362 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 ARMCX2Q7L311 632 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 TINF2Q9BSI4 451 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 TELO2Q9Y4R8 837 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 XBP1P17861 261 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 RGS2P41220 211 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 TRAPPC10P48553 1259 aa11.67□□□□□ -0.54
KCNMA1-264ENST00000639544 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 NASPP49321 788 aaPredicted RBP11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 NONOQ15233 471 aaKnown RBP eCLIP11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 JADE2Q9NQC1 790 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 KIF3AQ9Y496 699 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 KCNA2P16389 499 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 LBX1P52954 281 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 PRMT2P55345 433 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 UBXN2AP68543 259 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 ZSCAN16Q9H4T2 348 aaPredicted RBP11.66□□□□□ -0.54
KCNMA1-264ENST00000639544 ITGB3BPQ13352 177 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 ATP9AO75110 1047 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 STAM2O75886 525 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 PTGS1P23219 599 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 NEK8Q86SG6 692 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 VAV3Q9UKW4 847 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 PTCH2Q9Y6C5 1203 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 ARP10275 920 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 CLIC4Q9Y696 253 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
KCNMA1-264ENST00000639544 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 LOXHD1Q8IVV2 1947 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 MSH4O15457 936 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 TRIM29Q14134 588 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 CEP55Q53EZ4 464 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 AGO4Q9HCK5 861 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 POLR3EQ9NVU0 708 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 ALPK3Q96L96 1907 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 CYP2B6P20813 491 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 ARHGEF16Q5VV41 709 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-264ENST00000639544 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 PSMD10O75832 226 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 GPRASP2Q96D09 838 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 VTA1Q9NP79 307 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 ASB14A6NK59 587 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 CYP2C19P33261 490 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 FBXO16Q8IX29 292 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-264ENST00000639544 SIP14410 1827 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms