RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 NFXL1Q6ZNB6 911 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 CCDC82Q8N4S0 544 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 TMEM199Q8N511 208 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 CTAGE1Q96RT6 745 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 IWS1Q96ST2 819 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 MPHOSPH6Q99547 160 aaKnown RBP18.98■□□□□ 0.63
COLCA2-207ENST00000639470 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
COLCA2-207ENST00000639470 SEMA6BQ9H3T3 888 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 STXBP5LQ9Y2K9 1186 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 GH1P01241 217 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 ZNF286BP0CG31 522 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 MCM5P33992 734 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 USP17L6PQ6QN14 398 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 OTOP2Q7RTS6 562 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 MYLIPQ8WY64 445 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 IL23AQ9NPF7 189 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 MRVI1Q9Y6F6 885 aa18.97■□□□□ 0.63
COLCA2-207ENST00000639470 GCOM1H8Y6P7 765 aaPredicted RBP18.96■□□□□ 0.63
COLCA2-207ENST00000639470 EIF3JO75822 258 aaKnown RBP18.96■□□□□ 0.63
COLCA2-207ENST00000639470 DDAH1O94760 285 aa18.96■□□□□ 0.63
COLCA2-207ENST00000639470 POLR2MP0CAP2 368 aa18.96■□□□□ 0.63
COLCA2-207ENST00000639470 CPA1P15085 419 aa18.96■□□□□ 0.63
COLCA2-207ENST00000639470 RASIP1Q5U651 963 aa18.96■□□□□ 0.63
COLCA2-207ENST00000639470 CCDC69A6NI79 296 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 B4DLN1 442 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 DNAJB2P25686 324 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 MRPL12P52815 198 aaKnown RBP18.95■□□□□ 0.62
COLCA2-207ENST00000639470 MRPS9P82933 396 aaKnown RBP18.95■□□□□ 0.62
COLCA2-207ENST00000639470 HIC1Q14526 733 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 GDF6Q6KF10 455 aaPredicted RBP18.95■□□□□ 0.62
COLCA2-207ENST00000639470 DEFB128Q7Z7B8 93 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 VSIG10LQ86VR7 867 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 MICU3Q86XE3 530 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 SLC17A8Q8NDX2 589 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 CTCFLQ8NI51 663 aaPredicted RBP18.95■□□□□ 0.62
COLCA2-207ENST00000639470 SPZ1Q9BXG8 430 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 RTEL1Q9NZ71 1219 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 MYH6P13533 1939 aa18.95■□□□□ 0.62
COLCA2-207ENST00000639470 SCN10AQ9Y5Y9 1956 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
COLCA2-207ENST00000639470 ZNF200P98182 395 aaPredicted RBP18.94■□□□□ 0.62
COLCA2-207ENST00000639470 SEMA3FQ13275 785 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 GRIN2CQ14957 1233 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 HSDL1Q3SXM5 330 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 DHX38Q92620 1227 aaKnown RBP18.94■□□□□ 0.62
COLCA2-207ENST00000639470 TMEM87BQ96K49 555 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 ALG1Q9BT22 464 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 PBX4Q9BYU1 374 aa18.94■□□□□ 0.62
COLCA2-207ENST00000639470 MEIS2O14770 477 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 CDC45O75419 566 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 GGPS1O95749 300 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 RABGGTBP53611 331 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 UBE2SQ16763 222 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 DHX37Q8IY37 1157 aaKnown RBP18.93■□□□□ 0.62
COLCA2-207ENST00000639470 WNT8BQ93098 351 aa18.93■□□□□ 0.62
COLCA2-207ENST00000639470 RRP36Q96EU6 259 aaKnown RBP18.93■□□□□ 0.62
COLCA2-207ENST00000639470 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.92■□□□□ 0.62
COLCA2-207ENST00000639470 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.92■□□□□ 0.62
COLCA2-207ENST00000639470 FGBP02675 491 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 MYOGP15173 224 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 CCND2P30279 289 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 BRDTQ58F21 947 aaPredicted RBP18.92■□□□□ 0.62
COLCA2-207ENST00000639470 NFRKBQ6P4R8 1299 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
COLCA2-207ENST00000639470 HERVK_113Q902F9 699 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 CCDC136Q96JN2 1154 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 MAF1Q9H063 256 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 HDAC6Q9UBN7 1215 aa18.92■□□□□ 0.62
COLCA2-207ENST00000639470 YBX2Q9Y2T7 364 aaKnown RBP18.92■□□□□ 0.62
COLCA2-207ENST00000639470 KIF5BP33176 963 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 LIFRP42702 1097 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 PSEN2P49810 448 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 EXOSC10Q01780 885 aaKnown RBP18.91■□□□□ 0.62
COLCA2-207ENST00000639470 PTGISQ16647 500 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 TCTN1Q2MV58 587 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 CELF3Q5SZQ8 465 aaKnown RBP18.91■□□□□ 0.62
COLCA2-207ENST00000639470 MYSM1Q5VVJ2 828 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 APOA5Q6Q788 366 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 TMTC3Q6ZXV5 915 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 NEK1Q96PY6 1258 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 MAP3K14Q99558 947 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 SLC12A7Q9Y666 1083 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 FRMPD4Q14CM0 1322 aa18.91■□□□□ 0.62
COLCA2-207ENST00000639470 KPNA6O60684 536 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 MFSD10Q14728 455 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 GPNMBQ14956 572 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 DGKDQ16760 1214 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 TYW1BQ6NUM6 668 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 FANCBQ8NB91 859 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 PPTC7Q8NI37 304 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 EMID1Q96A84 441 aaPredicted RBP18.9■□□□□ 0.62
COLCA2-207ENST00000639470 TIFAQ96CG3 184 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 NKX2-4Q9H2Z4 354 aa18.9■□□□□ 0.62
COLCA2-207ENST00000639470 ZBBXA8MT70 800 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 HAS3O00219 553 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 F2P00734 622 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms