RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
CLN6-215ENST00000636674 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
CLN6-215ENST00000636674 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 NKRFO15226 690 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLN6-215ENST00000636674 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PLEKP08567 350 aaPredicted RBP16.14■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA8HP0CJ92 632 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
CLN6-215ENST00000636674 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 C2CD5Q86YS7 1000 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 BAP1Q92560 729 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 JAG2Q9Y219 1238 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 MYH10P35580 1976 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 SSU72P8A0A1W2PR75 194 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 MYMKA6NI61 221 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 EPHB6O15197 1021 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 GGCXP38435 758 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PSMD2Q13200 908 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 ASTE1Q2TB18 679 aaPredicted RBP16.14■□□□□ 0.17
CLN6-215ENST00000636674 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 LRRC55Q6ZSA7 311 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
CLN6-215ENST00000636674 EEF2KMTQ96G04 330 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 EYA3Q99504 573 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 SLC39A2Q9NP94 309 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 PLIN4Q96Q06 1357 aa16.14■□□□□ 0.17
CLN6-215ENST00000636674 RBAK-RBAKDNI3L0D1 243 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 EIF4A3P38919 411 aaKnown RBP16.13■□□□□ 0.17
CLN6-215ENST00000636674 CDK8P49336 464 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 DIXDC1Q155Q3 683 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 RIOX1Q9H6W3 641 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 RIC8AQ9NPQ8 531 aa16.13■□□□□ 0.17
CLN6-215ENST00000636674 A0A0U1RQG5 324 aaPredicted RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA6BA6NDN3 693 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 ZMYND10O75800 440 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 CLSTN1O94985 981 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 PDIA5Q14554 519 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 FOXR1Q6PIV2 292 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 GSPT2Q8IYD1 628 aaKnown RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 SH3GL2Q99962 352 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 RAB34Q9BZG1 259 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 C10orf71Q711Q0 1435 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 LRRC53A6NM62 1247 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 CALCRLQ16602 461 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 SMCR8Q8TEV9 937 aaPredicted RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 RAD54LQ92698 747 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 SYN2Q92777 582 aaPredicted RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 HPS3Q969F9 1004 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
CLN6-215ENST00000636674 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
CLN6-215ENST00000636674 TRIM66O15016 1216 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 AKR1B10O60218 316 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 MOCS3O95396 460 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 EPHB4P54760 987 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 SEPT2Q15019 361 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 GRIK5Q16478 980 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 USP17L2Q6R6M4 530 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 ZNF804AQ7Z570 1209 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 FAM76AQ8TAV0 307 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 CAVIN3Q969G5 261 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 PIGSQ96S52 555 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 NUCKS1Q9H1E3 243 aaKnown RBP16.11■□□□□ 0.17
CLN6-215ENST00000636674 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 RNF14Q9UBS8 474 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 GPR75-ASB3A0A0A6YYF3 556 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
CLN6-215ENST00000636674 TXKP42681 527 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 GLE1Q53GS7 698 aaKnown RBP16.11■□□□□ 0.17
CLN6-215ENST00000636674 GBP6Q6ZN66 633 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 RIN2Q8WYP3 895 aaPredicted RBP16.11■□□□□ 0.17
CLN6-215ENST00000636674 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 TSG101Q99816 390 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 LRRC1Q9BTT6 524 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
CLN6-215ENST00000636674 MTMR7Q9Y216 660 aa16.11■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA6CA6NDK9 693 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA8KD6RF30 607 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 GOLGA6DP0CG33 693 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 PLCG2P16885 1265 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 MAGEA1P43355 309 aa16.1■□□□□ 0.17
CLN6-215ENST00000636674 NNTQ13423 1086 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms