RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 PTPRAP18433 802 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 VCAM1P19320 739 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 ERCC5P28715 1186 aaPredicted RBP20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 LRMPQ12912 555 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 PRR16Q569H4 304 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 MOXD1Q6UVY6 613 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 KLRG1Q96E93 195 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 CUEDC2Q9H467 287 aa20.72■□□□□ 0.91
PCDHB2-202ENST00000622947 TPM4P67936 248 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 KMT5BQ4FZB7 885 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 PRPF38AQ8NAV1 312 aaKnown RBP20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 SNX29Q8TEQ0 813 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 SLF1Q9BQI6 1058 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 TRIM9Q9C026 710 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 PYCARDQ9ULZ3 195 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 RLFQ13129 1914 aa20.71■□□□□ 0.91
PCDHB2-202ENST00000622947 CIITAP33076 1130 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 STAT3P40763 770 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 SPIRE1Q08AE8 756 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 DHX8Q14562 1220 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 PTPN21Q16825 1174 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 Q4G0T1 1027 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 ZNF658Q5TYW1 1059 aaPredicted RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 MCTP2Q6DN12 878 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 CALML4Q96GE6 196 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 NAP1L4Q99733 375 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 DDX41Q9UJV9 622 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 MAPK8IP1Q9UQF2 711 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 ICAM1P05362 532 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 NCBP1Q09161 790 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 MCM6Q14566 821 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 TMEM119Q4V9L6 283 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 CACTINQ8WUQ7 758 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 WNK4Q96J92 1243 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 WDR18Q9BV38 432 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 TANGO6Q9C0B7 1094 aa20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 MRPL11Q9Y3B7 192 aaKnown RBP20.7■□□□□ 0.9
PCDHB2-202ENST00000622947 CYP3A4P08684 503 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 PRCPP42785 496 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 UBXN2AP68543 259 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 MAGEF1Q9HAY2 307 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 CTNND2Q9UQB3 1225 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 IGLV3-22A0A075B6J6 115 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 GCOM1H8Y6P7 765 aaPredicted RBP20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 MARCH6O60337 910 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 POLR2MP0CAP2 368 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 BACE1P56817 501 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 PRKG1Q13976 671 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 CT47A1Q5JQC4 288 aaPredicted RBP20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 KRT79Q5XKE5 535 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 FILIP1Q7Z7B0 1213 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 CLEC4DQ8WXI8 215 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 ZHX2Q9Y6X8 837 aa20.69■□□□□ 0.9
PCDHB2-202ENST00000622947 SYNRGQ9UMZ2 1314 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 MYMKA6NI61 221 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 NFIBO00712 420 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 MSH4O15457 936 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 RHOBTB3O94955 611 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 MYL1P05976 194 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 UBASH3AP57075 661 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 TRAF1Q13077 416 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 KCNB1Q14721 858 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 SLC30A10Q6XR72 485 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 PLCD3Q8N3E9 789 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 ZNF280CQ8ND82 737 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 ZFP91Q96JP5 570 aaPredicted RBP20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 SLC38A10Q9HBR0 1119 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 COL20A1Q9P218 1284 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 ABCB11O95342 1321 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 FLOT1O75955 427 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 SERPINC1P01008 464 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 SPATA1Q5VX52 437 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 CPXCR1Q8N123 301 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 RAVER2Q9HCJ3 691 aaKnown RBP20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 RMND1Q9NWS8 449 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 PPP1R9AQ9ULJ8 1098 aa20.68■□□□□ 0.9
PCDHB2-202ENST00000622947 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 APTXQ7Z2E3 356 aaKnown RBP20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 LARP4BQ92615 738 aaKnown RBP20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 RAD54LQ92698 747 aa20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 STK17AQ9UEE5 414 aa20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 PPP2R3BQ9Y5P8 575 aa20.67■□□□□ 0.9
PCDHB2-202ENST00000622947 USP2O75604 605 aaPredicted RBP20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 TERF2Q15554 542 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 HYIQ5T013 277 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 PICK1Q9NRD5 415 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 ADARB2Q9NS39 739 aaKnown RBP20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 HSD17B4P51659 736 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 PMS1P54277 932 aaKnown RBP20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 HMGCS2P54868 508 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 MUM1L1Q5H9M0 696 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
PCDHB2-202ENST00000622947 SLFN12Q8IYM2 578 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms