RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 AKNAD1Q5T1N1 836 aa14.27□□□□□ -0.12
COL1A2-213ENST00000620463 ZNF654Q8IZM8 581 aa14.27□□□□□ -0.12
COL1A2-213ENST00000620463 MSANTD4Q8NCY6 345 aa14.27□□□□□ -0.12
COL1A2-213ENST00000620463 GRK7Q8WTQ7 553 aa14.27□□□□□ -0.12
COL1A2-213ENST00000620463 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.12
COL1A2-213ENST00000620463 EDC4Q6P2E9 1401 aaKnown RBP14.27□□□□□ -0.13
COL1A2-213ENST00000620463 KCNB1Q14721 858 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 PPP2R5BQ15173 497 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 TRPM8Q7Z2W7 1104 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 SNX24Q9Y343 169 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 TTC26A0AVF1 554 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 CALUO43852 315 aaPredicted RBP14.27□□□□□ -0.13
COL1A2-213ENST00000620463 HOXB7P09629 217 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.13
COL1A2-213ENST00000620463 PHBP35232 272 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
COL1A2-213ENST00000620463 P2RX5Q93086 422 aa14.27□□□□□ -0.13
COL1A2-213ENST00000620463 ARHGAP10A1A4S6 786 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 GMNNO75496 209 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 PALMO75781 387 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 GNA14O95837 355 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 PPP4R1Q8TF05 950 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 MRPL46Q9H2W6 279 aaKnown RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 A0A0G2JND7 137 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 KCNA6P17658 529 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 C16orf87Q6PH81 154 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 LCA5Q86VQ0 697 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 ZKSCAN4Q969J2 545 aaPredicted RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 ARMCX3Q9UH62 379 aaPredicted RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 TSC22D4Q9Y3Q8 395 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 PCDHB13Q9Y5F0 798 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 KDRP35968 1356 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 NVLO15381 856 aaKnown RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 RASGRP2Q7LDG7 609 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 DTX3LQ8TDB6 740 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 USP6NLQ92738 828 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 DDX47Q9H0S4 455 aaKnown RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 DNAJC17Q9NVM6 304 aaKnown RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 TLR7Q9NYK1 1049 aaKnown RBP14.26□□□□□ -0.13
COL1A2-213ENST00000620463 ADAMTS1Q9UHI8 967 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 ZFP69BQ9UJL9 534 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 TRPM2O94759 1503 aa14.26□□□□□ -0.13
COL1A2-213ENST00000620463 CASP1P29466 404 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 NR5A1Q13285 461 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 TBC1D22AQ8WUA7 517 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 DHTKD1Q96HY7 919 aaPredicted RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 LZTS1Q9Y250 596 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 TMED10P49755 219 aaKnown RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 MAN2A1Q16706 1144 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 XAGE2Q96GT9 111 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 PAGE5Q96GU1 130 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 NDE1Q9NXR1 346 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 SCTRP47872 440 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 ARHGAP22Q7Z5H3 698 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 SMCR8Q8TEV9 937 aaPredicted RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 SNX12Q9UMY4 172 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 MAGI3Q5TCQ9 1506 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 NDC80O14777 642 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 LDHCP07864 332 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 BCRP11274 1271 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 WDR93Q6P2C0 686 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 RSRC2Q7L4I2 434 aaKnown RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 FANCBQ8NB91 859 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
COL1A2-213ENST00000620463 CUEDC2Q9H467 287 aa14.25□□□□□ -0.13
COL1A2-213ENST00000620463 BAG3O95817 575 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 FGGP02679 453 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ZAP70P43403 619 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 SRRM1Q8IYB3 904 aaKnown RBP14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ARL8AQ96BM9 186 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 XPO6Q96QU8 1125 aaKnown RBP14.24□□□□□ -0.13
COL1A2-213ENST00000620463 TGS1Q96RS0 853 aaKnown RBP14.24□□□□□ -0.13
COL1A2-213ENST00000620463 CHP1Q99653 195 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 TRIM10Q9UDY6 481 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ERFP50548 548 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 PSMD7P51665 324 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 MESDQ14696 234 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ANKRD20A4Q4UJ75 823 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ANKRD20A8PQ5CZ79 823 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ANKRD20A2Q5SQ80 823 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 ANKRD20A1Q5TYW2 823 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 FAM133AQ8N9E0 248 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 OR2W6PQ8NHA6 318 aa14.24□□□□□ -0.13
COL1A2-213ENST00000620463 FAM210AQ96ND0 272 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms