RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	NYX	Q9GZU5	481 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CXorf56	Q9H5V9	222 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	LRRC53	A6NM62	1247 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	USP17L5	A8MUK1	530 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	TULP1	O00294	542 aa	Predicted RBP	16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	EIF3H	O15372	352 aa	Known RBP eCLIP	16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	TDP2	O95551	362 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	INPP5B	P32019	993 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CDK8	P49336	464 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	GNGT1	P63211	74 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CACNB1	Q02641	598 aa	Predicted RBP	16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CCDC40	Q4G0X9	1142 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	MIIP	Q5JXC2	388 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	NELFCD	Q8IXH7	590 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CCDC170	Q8IYT3	715 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	CEP95	Q96GE4	821 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	RPGRIP1	Q96KN7	1286 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	RUFY1	Q96T51	708 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	POLD4	Q9HCU8	107 aa		16.02	■□□□□ 0.16
SMTN-223	ENST00000619644	SPATA31A1	Q5TZJ5	1347 aa		16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	GFPT1	Q06210	699 aa	Predicted RBP	16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	VWA3B	Q502W6	1294 aa		16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	WDR66	Q8TBY9	1149 aa		16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	ALS2CR12	Q96Q35	445 aa		16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	ARHGAP20	Q9P2F6	1191 aa		16.02	■□□□□ 0.15
SMTN-223	ENST00000619644	MYMK	A6NI61	221 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	MMP14	P50281	582 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	MEA1	Q16626	185 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	TMEM266	Q2M3C6	531 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	DMGDH	Q9UI17	866 aa	Known RBP	16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	SAMM50	Q9Y512	469 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	FLT1	P17948	1338 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	PALM3	A6NDB9	673 aa	Predicted RBP	16.01	■□□□□ 0.15
SMTN-223	ENST00000619644		M0R2N6	131 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	TRAF5	O00463	557 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	LAD1	O00515	517 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	MYL1	P05976	194 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	MAP2K2	P36507	400 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	TRIM58	Q8NG06	486 aa		16.01	■□□□□ 0.15
SMTN-223	ENST00000619644	USP8	P40818	1118 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	PAFAH1B1	P43034	410 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	UBE2S	Q16763	222 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	RETREG2	Q8NC44	543 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	LARP4B	Q92615	738 aa	Known RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	AK8	Q96MA6	479 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	ZMYND12	Q9H0C1	365 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	ZNF287	Q9HBT7	754 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	XIRP1	Q702N8	1843 aa	Known RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	DOT1L	Q8TEK3	1739 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	MYH10	P35580	1976 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	PSEN1	P49768	467 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	GALNT17	Q6IS24	598 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	TMED8	Q6PL24	325 aa	Predicted RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	IFT81	Q8WYA0	676 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	MS4A14	Q96JA4	679 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	TTYH3	Q9C0H2	523 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	FAM184B	Q9ULE4	1060 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	SLC37A4	O43826	429 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	GSTO1	P78417	241 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	KCTD19	Q17RG1	926 aa	Predicted RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	KRT79	Q5XKE5	535 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	AEN	Q8WTP8	325 aa	Known RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	NUDT12	Q9BQG2	462 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	CDCA7	Q9BWT1	371 aa	Predicted RBP	16	■□□□□ 0.15
SMTN-223	ENST00000619644	TSGA10	Q9BZW7	698 aa		16	■□□□□ 0.15
SMTN-223	ENST00000619644	LDHC	P07864	332 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	PRPH	P41219	470 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	EPS15	P42566	896 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	APBA1	Q02410	837 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	C7orf25	Q9BPX7	421 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	MMTAG2	Q9BU76	263 aa	Known RBP	15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	CUEDC2	Q9H467	287 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	SNX12	Q9UMY4	172 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	GBP6	Q6ZN66	633 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	CNPY4	Q8N129	248 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	DDX12P	Q92771	950 aa		15.99	■□□□□ 0.15
SMTN-223	ENST00000619644	ZNF804A	Q7Z570	1209 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	SPATA4	Q8NEY3	305 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	OSBPL9	Q96SU4	736 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	TSG101	Q99816	390 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	CAPN7	Q9Y6W3	813 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	ABCA3	Q99758	1704 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	ESYT3	A0FGR9	886 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	MPHOSPH10	O00566	681 aa	Known RBP	15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	UFL1	O94874	794 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	KRT18	P05783	430 aa	Known RBP	15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	GRB10	Q13322	594 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	KCTD16	Q68DU8	428 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	PACSIN2	Q9UNF0	486 aa	Predicted RBP	15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	SLC16A2	P36021	539 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	SLC1A4	P43007	532 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	MAN2A1	Q16706	1144 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	C8orf74	Q6P047	294 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	SH3GL2	Q99962	352 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	SH2D4A	Q9H788	454 aa		15.98	■□□□□ 0.15
SMTN-223	ENST00000619644	GOLGA8K	D6RF30	607 aa		15.97	■□□□□ 0.15
SMTN-223	ENST00000619644	FTCD	O95954	541 aa		15.97	■□□□□ 0.15
SMTN-223	ENST00000619644	KCNK18	Q7Z418	384 aa		15.97	■□□□□ 0.15
SMTN-223	ENST00000619644	CREG2	Q8IUH2	290 aa		15.97	■□□□□ 0.15
SMTN-223	ENST00000619644	DAGLB	Q8NCG7	672 aa		15.97	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms