RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 USP17L6PQ6QN14 398 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 HEATR3Q7Z4Q2 680 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 CCDC83Q8IWF9 413 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 ZNF713Q8N859 430 aaPredicted RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 TOX2Q96NM4 488 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 TAAR1Q96RJ0 339 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 SLC26A6Q9BXS9 759 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 SLKQ9H2G2 1235 aaPredicted RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 C11orf49Q9H6J7 331 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 VTA1Q9NP79 307 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 RBM27Q9P2N5 1060 aaKnown RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 LIMCH1Q9UPQ0 1083 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 MRPL11Q9Y3B7 192 aaKnown RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 CDH23Q9H251 3354 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 ZNF865P0CJ78 1059 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 TGFB3P10600 412 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 SCG2P13521 617 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 EDNRBP24530 442 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 CCND3P30281 292 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 IRX5P78411 483 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 ACVR2BQ13705 512 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 SNX17Q15036 470 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 ANKRD1Q15327 319 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 RNF207Q6ZRF8 634 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 ARMCX2Q7L311 632 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 SMARCC2Q8TAQ2 1214 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 RASGRP4Q8TDF6 673 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 DPF3Q92784 378 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 LENG1Q96BZ8 264 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 TMX3Q96JJ7 454 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 ZFP91Q96JP5 570 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 RNF26Q9BY78 433 aaPredicted RBP6.02□□□□□ -1.45
SHMT1-211ENST00000618902 PDGFCQ9NRA1 345 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 TMEM260Q9NX78 707 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 BARHL2Q9NY43 387 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 VPS54Q9P1Q0 977 aa6.02□□□□□ -1.45
SHMT1-211ENST00000618902 STK36Q9NRP7 1315 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 RBM47A0AV96 593 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 MAFGO15525 162 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 RGS20O76081 388 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 CFBP00751 764 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 POLR2MP0CAP2 368 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 CNGA1P29973 690 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 CLK2P49760 499 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 MNX1P50219 401 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 ALDH5A1P51649 535 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 FOSBP53539 338 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 NAPAP54920 295 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 GJA9P57773 515 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 SSRP1Q08945 709 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 KLHL40Q2TBA0 621 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 GJC2Q5T442 439 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 ANO1Q5XXA6 986 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 TAPT1Q6NXT6 567 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 FCHSD1Q86WN1 690 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 OXER1Q8TDS5 423 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 NSUN6Q8TEA1 469 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 SCFD2Q8WU76 684 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 INTS4Q96HW7 963 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 PAWRQ96IZ0 340 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 PGBD1Q96JS3 809 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 UPF3AQ9H1J1 476 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 RIC8AQ9NPQ8 531 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 XPNPEP3Q9NQH7 507 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 PXMP2Q9NR77 195 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 ORC3Q9UBD5 711 aaPredicted RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 SEC63Q9UGP8 760 aaKnown RBP6.01□□□□□ -1.45
SHMT1-211ENST00000618902 KCNJ14Q9UNX9 436 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 PHF24Q9UPV7 400 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 LRRC37A2A6NM11 1700 aa6.01□□□□□ -1.45
SHMT1-211ENST00000618902 FRMPD4Q14CM0 1322 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 C11orf97A0A1B0GVM6 126 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 ESYT2A0FGR8 921 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 MYADML2A6NDP7 307 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 FAM205CA6NFA0 338 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 SMCO2A6NFE2 343 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 M0R2N6 131 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 PIK3CDO00329 1044 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CPLX1O14810 134 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CTAGE5O15320 804 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 EIF3JO75822 258 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 ARIH2O95376 493 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 DEXIO95424 95 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 PARNO95453 639 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 CLCN1P35523 988 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CPT1AP50416 773 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 TERF1P54274 439 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 MRPS9P82933 396 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 SEMA3FQ13275 785 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CUL4AQ13619 759 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 LRRC41Q15345 812 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 EARS2Q5JPH6 523 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 JAKMIP3Q5VZ66 844 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 PPP1R18Q6NYC8 613 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms