RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ARHGEF37A1IGU5 675 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 EIF3BP55884 814 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 EHHADHQ08426 723 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 APOA5Q6Q788 366 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 LCMT1Q9UIC8 334 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 RCOR1Q9UKL0 485 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 NOC2LQ9Y3T9 749 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 ABCB5Q2M3G0 1257 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 ALS2CLQ60I27 953 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 JADE1Q6IE81 842 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 ANKRD36BP1Q96IX9 119 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 CLIC6Q96NY7 704 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 EPS15L1Q9UBC2 864 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 SYNMO15061 1565 aa18.91■□□□□ 0.62
HMGXB3-206ENST00000613459 MED7O43513 233 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 STX1BP61266 288 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 SLC35F6Q8N357 371 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 WHAMMQ8TF30 809 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 GPKOWQ92917 476 aaPredicted RBP eCLIP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 FAM8A1Q9UBU6 413 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 CFAP74Q9C0B2 1584 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 ECEL1O95672 775 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 USP14P54578 494 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 YWHAGP61981 247 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 RASSF7Q02833 373 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 IFT88Q13099 833 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 ZNF827Q17R98 1081 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 SDR42E1Q8WUS8 393 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 TXLNGQ9NUQ3 528 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 NR2F2P24468 414 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 SURF1Q15526 300 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 NSUN7Q8NE18 718 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 EXOC4Q96A65 974 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 GYG1P46976 350 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 TMCO4Q5TGY1 634 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 PDZD8Q8NEN9 1154 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 NACC1Q96RE7 527 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 DIS3Q9Y2L1 958 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 PFDN1O60925 122 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 DLATP10515 647 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 BCAMP50895 628 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 MMEL1Q495T6 779 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 FAM186BQ8IYM0 893 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 ZC3H15Q8WU90 426 aaKnown RBP18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 KAT6BQ8WYB5 2073 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 PANX2Q96RD6 677 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 KIAA1024Q9UPX6 916 aa18.9■□□□□ 0.62
HMGXB3-206ENST00000613459 CCDC151A5D8V7 595 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 ZBED6P86452 979 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 CACTINQ8WUQ7 758 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 SUDS3Q9H7L9 328 aaPredicted RBP18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 TTLL1O95922 423 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 PEX19P40855 299 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 RFX6Q8HWS3 928 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 SEC31AO94979 1220 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 EFHD1Q9BUP0 239 aa18.89■□□□□ 0.61
HMGXB3-206ENST00000613459 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 TMEM232C9JQI7 657 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 MAPK4P31152 587 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 HSPA2P54652 639 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 NME8Q8N427 588 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 ANAPC5Q9UJX4 755 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 NEO1Q92859 1461 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 ECE1P42892 770 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 PDCD2Q16342 344 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 TMTC3Q6ZXV5 915 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 TRMT2AQ8IZ69 625 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 FAM193BQ96PV7 902 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 LRRIQ4A6NIV6 560 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 INPP1P49441 399 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 PDE1BQ01064 536 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 POLA2Q14181 598 aa18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 KIF23Q02241 960 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-206ENST00000613459 PRPF3O43395 683 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 MMP1P03956 469 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 VPS41P49754 854 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 MAD1L1Q9Y6D9 718 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 HEXIM1O94992 359 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 SERPING1P05155 500 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 TTC19Q6DKK2 380 aaPredicted RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 ZNF653Q96CK0 615 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 MCF2LO15068 1137 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 CCNE1P24864 410 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 KCTD16Q68DU8 428 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 MIS18BP1Q6P0N0 1132 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 CCDC127Q96BQ5 260 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 HDAC11Q96DB2 347 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 IFNAR1P17181 557 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms