RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 KLF18A0A0U1RQI7 1052 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 MEIS2O14770 477 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 RGS20O76081 388 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 GH1P01241 217 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 TGFB3P10600 412 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 MYCLP12524 364 aaPredicted RBP22.25■■□□□ 1.15
TCF3-219ENST00000610756 RAG1P15918 1043 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 ITGB8P26012 769 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 FUT2Q10981 343 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 RTN1Q16799 776 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 LRIT3Q3SXY7 679 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 KCNV1Q6PIU1 500 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 Q6ZUG5 572 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 FAM126BQ8IXS8 530 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 TBX21Q9UL17 535 aa22.25■■□□□ 1.15
TCF3-219ENST00000610756 TLR3O15455 904 aaKnown RBP22.24■■□□□ 1.15
TCF3-219ENST00000610756 CD4P01730 458 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 RPS6KB1P23443 525 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 CCND2P30279 289 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 USP17L6PQ6QN14 398 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 CUL5Q93034 780 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 EMID1Q96A84 441 aaPredicted RBP22.24■■□□□ 1.15
TCF3-219ENST00000610756 MTG1Q9BT17 334 aaPredicted RBP22.24■■□□□ 1.15
TCF3-219ENST00000610756 AGXT2Q9BYV1 514 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 PSTPIP2Q9H939 334 aa22.24■■□□□ 1.15
TCF3-219ENST00000610756 FAM217BQ9NTX9 383 aaPredicted RBP22.24■■□□□ 1.15
TCF3-219ENST00000610756 SZT2Q5T011 3432 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 hCG_1642624A0A1W2PR95 340 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 TIMP1P01033 207 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 MYL3P08590 195 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 ARHGAP1Q07960 439 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 IL31RAQ8NI17 732 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 SMARCC2Q8TAQ2 1214 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 MRVI1Q9Y6F6 885 aa22.23■■□□□ 1.15
TCF3-219ENST00000610756 FRMPD4Q14CM0 1322 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 GOLGA8AA7E2F4 631 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 GOLGA8BA8MQT2 603 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 STAM2O75886 525 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 PSMC6P62333 389 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 LAMC2Q13753 1193 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 AFG1LQ8WV93 481 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 BRF1Q92994 677 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
TCF3-219ENST00000610756 V9GY48 417 aaPredicted RBP22.22■■□□□ 1.15
TCF3-219ENST00000610756 CASTP20810 708 aaKnown RBP22.21■■□□□ 1.15
TCF3-219ENST00000610756 CDC27P30260 824 aa22.21■■□□□ 1.15
TCF3-219ENST00000610756 APOBRQ0VD83 1088 aa22.21■■□□□ 1.15
TCF3-219ENST00000610756 XRRA1Q6P2D8 792 aa22.21■■□□□ 1.15
TCF3-219ENST00000610756 RUFY3Q7L099 469 aa22.21■■□□□ 1.15
TCF3-219ENST00000610756 TEX2Q8IWB9 1127 aa22.21■■□□□ 1.15
TCF3-219ENST00000610756 ADD1P35611 737 aaKnown RBP22.2■■□□□ 1.14
TCF3-219ENST00000610756 EVCP57679 992 aa22.2■■□□□ 1.14
TCF3-219ENST00000610756 MRPS9P82933 396 aaKnown RBP22.2■■□□□ 1.14
TCF3-219ENST00000610756 MFSD5Q6N075 450 aa22.2■■□□□ 1.14
TCF3-219ENST00000610756 DHX37Q8IY37 1157 aaKnown RBP22.2■■□□□ 1.14
TCF3-219ENST00000610756 TM6SF1Q9BZW5 370 aa22.2■■□□□ 1.14
TCF3-219ENST00000610756 CNTNAP5Q8WYK1 1306 aa22.2■■□□□ 1.14
TCF3-219ENST00000610756 SOX1O00570 391 aaPredicted RBP22.19■■□□□ 1.14
TCF3-219ENST00000610756 MMP3P08254 477 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 ICAM3P32942 547 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 METAP2P50579 478 aaKnown RBP eCLIP22.19■■□□□ 1.141e-7■■■■□ 24.9
TCF3-219ENST00000610756 MYSM1Q5VVJ2 828 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 PCNX4Q63HM2 1172 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 HEATR3Q7Z4Q2 680 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 INPP4AQ96PE3 977 aaPredicted RBP22.19■■□□□ 1.14
TCF3-219ENST00000610756 TRPV6Q9H1D0 765 aa22.19■■□□□ 1.14
TCF3-219ENST00000610756 ALDH8A1Q9H2A2 487 aaPredicted RBP22.19■■□□□ 1.14
TCF3-219ENST00000610756 NAP1L2Q9ULW6 460 aaPredicted RBP22.19■■□□□ 1.14
TCF3-219ENST00000610756 hCG_1984214I3L0E3 225 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 B4GALT4O60513 344 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 SP2Q02086 613 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 FPGSQ05932 587 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 DGKDQ16760 1214 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 NBPF20Q3BBV1 942 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 GNPTABQ3T906 1256 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 CELF3Q5SZQ8 465 aaKnown RBP22.18■■□□□ 1.14
TCF3-219ENST00000610756 WWC2Q6AWC2 1192 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 NFRKBQ6P4R8 1299 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 ZNF713Q8N859 430 aaPredicted RBP22.18■■□□□ 1.14
TCF3-219ENST00000610756 PPTC7Q8NI37 304 aa22.18■■□□□ 1.14
TCF3-219ENST00000610756 ZFP91Q96JP5 570 aaPredicted RBP22.18■■□□□ 1.14
TCF3-219ENST00000610756 SPATA31C2B4DYI2 1134 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 PPFIA4O75335 1185 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 SUPT20HL2P0C7V6 817 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 PTPN11Q06124 597 aaPredicted RBP22.17■■□□□ 1.14
TCF3-219ENST00000610756 SHHQ15465 462 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 GPR153Q6NV75 609 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 GPKOWQ92917 476 aaPredicted RBP eCLIP22.17■■□□□ 1.14
TCF3-219ENST00000610756 RTEL1Q9NZ71 1219 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 CYP46A1Q9Y6A2 500 aa22.17■■□□□ 1.14
TCF3-219ENST00000610756 PPP1R18Q6NYC8 613 aa22.16■■□□□ 1.14
TCF3-219ENST00000610756 LRCH3Q96II8 777 aa22.16■■□□□ 1.14
TCF3-219ENST00000610756 RIC8AQ9NPQ8 531 aa22.16■■□□□ 1.14
TCF3-219ENST00000610756 BARHL2Q9NY43 387 aa22.16■■□□□ 1.14
TCF3-219ENST00000610756 NID2Q14112 1375 aa22.16■■□□□ 1.14
TCF3-219ENST00000610756 SPDYE3A6NKU9 549 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 GGPS1O95749 300 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 HOXD8P13378 290 aaPredicted RBP22.15■■□□□ 1.14
TCF3-219ENST00000610756 UBA1P22314 1058 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms