RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HEATR3Q7Z4Q2 680 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 RPAINQ86UA6 219 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 OTUD6BQ8N6M0 293 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 SPZ1Q9BXG8 430 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 A1CFQ9NQ94 594 aaKnown RBP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 NIP7Q9Y221 180 aaKnown RBP eCLIP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 PALM3A6NDB9 673 aaPredicted RBP24.71■■□□□ 1.55
SHANK2-220ENST00000608988 SERPING1P05155 500 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 SLC9C1Q4G0N8 1177 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 STAG2Q8N3U4 1231 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 CCDC43Q96MW1 224 aaKnown RBP24.71■■□□□ 1.55
SHANK2-220ENST00000608988 EHD4Q9H223 541 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 C6orf50Q9HD87 102 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 CEP72Q9P209 647 aa24.71■■□□□ 1.55
SHANK2-220ENST00000608988 LSP1P33241 339 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 PDCLQ13371 301 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 DRP2Q13474 957 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 CACNA2D4Q7Z3S7 1137 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 NEK8Q86SG6 692 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 ARFGAP2Q8N6H7 521 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 IL17RBQ9NRM6 502 aa24.7■■□□□ 1.55
SHANK2-220ENST00000608988 EPHB6O15197 1021 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 HEXIM1O94992 359 aaKnown RBP24.7■■□□□ 1.54
SHANK2-220ENST00000608988 CYP2D6P10635 497 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 SMARCA1P28370 1054 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 NAP1L1P55209 391 aaKnown RBP24.7■■□□□ 1.54
SHANK2-220ENST00000608988 NAB2Q15742 525 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 PPP4R3AQ6IN85 833 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 MTMR8Q96EF0 704 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 ZNF652Q9Y2D9 606 aa24.7■■□□□ 1.54
SHANK2-220ENST00000608988 FNTAP49354 379 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 TNNC1P63316 161 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 DDR1Q08345 913 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 C12orf60Q5U649 245 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 HGSNATQ68CP4 663 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 CABS1Q96KC9 395 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 ATP6V1G3Q96LB4 118 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 MMTAG2Q9BU76 263 aaKnown RBP24.69■■□□□ 1.54
SHANK2-220ENST00000608988 MINPP1Q9UNW1 487 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 CCDC88AQ3V6T2 1871 aa24.69■■□□□ 1.54
SHANK2-220ENST00000608988 ZNF233A6NK53 670 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 CCNT1O60563 726 aaKnown RBP24.68■■□□□ 1.54
SHANK2-220ENST00000608988 PPP1R37O75864 691 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 NR1D1P20393 614 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 CXCR5P32302 372 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 HSPA9P38646 679 aaKnown RBP24.68■■□□□ 1.54
SHANK2-220ENST00000608988 FXR2P51116 673 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■■■■□ 21.7
SHANK2-220ENST00000608988 RASSF7Q02833 373 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SEPT2Q15019 361 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 CDC37Q16543 378 aaPredicted RBP24.68■■□□□ 1.54
SHANK2-220ENST00000608988 PTGISQ16647 500 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SKIDA1Q1XH10 827 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SPTY2D1Q68D10 685 aaPredicted RBP24.68■■□□□ 1.54
SHANK2-220ENST00000608988 LRRC55Q6ZSA7 311 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 TACO1Q9BSH4 297 aaKnown RBP24.68■■□□□ 1.54
SHANK2-220ENST00000608988 PCDHGC5Q9Y5F6 944 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 BTNL10A8MVZ5 291 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 NCK2O43639 380 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 GLI1P08151 1106 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SFMBT2Q5VUG0 894 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 EPB41L5Q9HCM4 733 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SLC39A2Q9NP94 309 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 SALL4Q9UJQ4 1053 aa24.68■■□□□ 1.54
SHANK2-220ENST00000608988 ESYT2A0FGR8 921 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 MYBP10242 640 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 SLC1A4P43007 532 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 CARSP49589 748 aaKnown RBP24.67■■□□□ 1.54
SHANK2-220ENST00000608988 GSCP56915 257 aaPredicted RBP24.67■■□□□ 1.54
SHANK2-220ENST00000608988 MEI1Q5TIA1 1274 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 RNPC3Q96LT9 517 aaKnown RBP24.67■■□□□ 1.54
SHANK2-220ENST00000608988 MCM9Q9NXL9 1143 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 NFU1Q9UMS0 254 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 SAMM50Q9Y512 469 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 COL4A1P02462 1669 aa24.67■■□□□ 1.54
SHANK2-220ENST00000608988 BAZ2BQ9UIF8 2168 aaKnown RBP24.67■■□□□ 1.54
SHANK2-220ENST00000608988 hCG_1984214I3L0E3 225 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 CYTH3O43739 400 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 CRKLP46109 303 aaKnown RBP24.66■■□□□ 1.54
SHANK2-220ENST00000608988 GUCY2DQ02846 1103 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 SLC35G1Q2M3R5 365 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 LETM2Q2VYF4 491 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 C10orf76Q5T2E6 689 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 NAA35Q5VZE5 725 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 ZNF713Q8N859 430 aaPredicted RBP24.66■■□□□ 1.54
SHANK2-220ENST00000608988 PIK3R5Q8WYR1 880 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 RAB34Q9BZG1 259 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 PLCB1Q9NQ66 1216 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 LTBP4Q8N2S1 1624 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 GNA14O95837 355 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 MDH1P40925 334 aaKnown RBP24.66■■□□□ 1.54
SHANK2-220ENST00000608988 NAPAP54920 295 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 GFPT1Q06210 699 aaPredicted RBP24.66■■□□□ 1.54
SHANK2-220ENST00000608988 EHHADHQ08426 723 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 GRB10Q13322 594 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 CUL1Q13616 776 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 TMEM266Q2M3C6 531 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 KCNV1Q6PIU1 500 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 LARP4BQ92615 738 aaKnown RBP24.66■■□□□ 1.54
SHANK2-220ENST00000608988 EEF2KMTQ96G04 330 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 INPP4AQ96PE3 977 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms