RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 CAGE1Q8TC20 777 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 ADAMTS19Q8TE59 1207 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 UBAC1Q9BSL1 405 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 KRT23Q9C075 422 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 JMJD4Q9H9V9 463 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 VAT1LQ9HCJ6 419 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 CTNNA3Q9UI47 895 aa23.58■■□□□ 1.37
PPFIA3-204ENST00000602492 ARHGEF16Q5VV41 709 aa23.57■■□□□ 1.36
PPFIA3-204ENST00000602492 SESTD1Q86VW0 696 aa23.57■■□□□ 1.36
PPFIA3-204ENST00000602492 AFAP1L1Q8TED9 768 aa23.57■■□□□ 1.36
PPFIA3-204ENST00000602492 CNNM2Q9H8M5 875 aa23.57■■□□□ 1.36
PPFIA3-204ENST00000602492 TET1Q8NFU7 2136 aa23.57■■□□□ 1.36
PPFIA3-204ENST00000602492 KIF28PB7ZC32 967 aa23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 GTPBP6O43824 516 aaPredicted RBP23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 BAIAP3O94812 1187 aa23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 EIF2AK2P19525 551 aaKnown RBP23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 DGKDQ16760 1214 aa23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 HERC6Q8IVU3 1022 aa23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 KAT2BQ92831 832 aa23.56■■□□□ 1.36
PPFIA3-204ENST00000602492 REV3LO60673 3130 aa23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 MYH6P13533 1939 aa23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 EIF3JO75822 258 aaKnown RBP23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 IGHDP01880 384 aa23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 GDF6Q6KF10 455 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 UHRF1Q96T88 793 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 CERS4Q9HA82 394 aa23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 DDX41Q9UJV9 622 aaKnown RBP23.55■■□□□ 1.36
PPFIA3-204ENST00000602492 TRIP12Q14669 1992 aaPredicted RBP23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 RFXAPO00287 272 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 CFBP00751 764 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 NR3C2P08235 984 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 SELPP16109 830 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 KCNJ6P48051 423 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 SKIV2LQ15477 1246 aaKnown RBP23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 IFIT1BQ5T764 474 aaKnown RBP23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 EMID1Q96A84 441 aaPredicted RBP23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 CTAGE1Q96RT6 745 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 AMNQ9BXJ7 453 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 PXMP2Q9NR77 195 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 MRVI1Q9Y6F6 885 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 KIAA1217Q5T5P2 1943 aa23.54■■□□□ 1.36
PPFIA3-204ENST00000602492 POU3F3P20264 500 aaPredicted RBP23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 TAP1Q03518 808 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 LAMC2Q13753 1193 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 C7orf31Q8N865 590 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 KATNAL1Q9BW62 490 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 GTF2IRD1Q9UHL9 959 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 MTCH2Q9Y6C9 303 aa23.53■■□□□ 1.36
PPFIA3-204ENST00000602492 PARNO95453 639 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 PSEN2P49810 448 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 HSD17B4P51659 736 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 AAK1Q2M2I8 961 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 LRRC8DQ7L1W4 858 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 STAG2Q8N3U4 1231 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 ARNTL2Q8WYA1 636 aa23.52■■□□□ 1.36
PPFIA3-204ENST00000602492 XIRP2A4UGR9 3374 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 EPOPA6NHQ4 379 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 TLL1O43897 1013 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 RBL2Q08999 1139 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 DHX37Q8IY37 1157 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 PPTC7Q8NI37 304 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 DHX38Q92620 1227 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 ALG1Q9BT22 464 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 HDAC6Q9UBN7 1215 aa23.51■■□□□ 1.35
PPFIA3-204ENST00000602492 KLRF2D3W0D1 207 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 OPLAHO14841 1288 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 ARHGEF15O94989 841 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 WDR5P61964 334 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 GHRHRQ02643 423 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 MFSD10Q14728 455 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 PDCD2LQ9BRP1 358 aa23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 MAP3K20Q9NYL2 800 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-204ENST00000602492 ZBTB5O15062 677 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 F2P00734 622 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 ZNF286BP0CG31 522 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 CKBP12277 381 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 MYCLP12524 364 aaPredicted RBP23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 TFF2Q03403 129 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 GPNMBQ14956 572 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 SEC23AQ15436 765 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 KIAA0753Q2KHM9 967 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 CNKSR3Q6P9H4 555 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 EXOC6Q8TAG9 804 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 MTMR8Q96EF0 704 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 PCDHA1Q9Y5I3 950 aa23.49■■□□□ 1.35
PPFIA3-204ENST00000602492 PPP1R11O60927 126 aaPredicted RBP23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 CXCL10P02778 98 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 PTK7Q13308 1070 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 KCNV1Q6PIU1 500 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 STOX1Q6ZVD7 989 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 SAMD3Q8N6K7 520 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 ZBED2Q9BTP6 218 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 MAD2L2Q9UI95 211 aa23.48■■□□□ 1.35
PPFIA3-204ENST00000602492 HAS3O00219 553 aa23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 NBNO60934 754 aa23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 HOXD8P13378 290 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 BMP1P13497 986 aa23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 HOXA13P31271 388 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 TRDNQ13061 729 aa23.47■■□□□ 1.35
PPFIA3-204ENST00000602492 TRAF1Q13077 416 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms