RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 POLR2MP0CAP2 368 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 EIF2AK2P19525 551 aaKnown RBP21.46■■□□□ 1.03
SNRPA-205ENST00000598923 ITGA7Q13683 1181 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 RTN1Q16799 776 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 TMTC3Q6ZXV5 915 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 FCHSD1Q86WN1 690 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 BRF1Q92994 677 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.46■■□□□ 1.032e-7■□□□□ 11.1
SNRPA-205ENST00000598923 SEZ6LQ9BYH1 1024 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 WDR11Q9BZH6 1224 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 UNC80Q8N2C7 3258 aa21.46■■□□□ 1.03
SNRPA-205ENST00000598923 EYSQ5T1H1 3165 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 GOLGA8AA7E2F4 631 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 GOLGA8BA8MQT2 603 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 ZEB2O60315 1214 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 EDNRBP24530 442 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 HSD17B4P51659 736 aa21.45■■□□□ 1.02
SNRPA-205ENST00000598923 PPIGQ13427 754 aaKnown RBP eCLIP21.45■■□□□ 1.027e-9■□□□□ 9.6
SNRPA-205ENST00000598923 CDX2Q99626 313 aaPredicted RBP21.45■■□□□ 1.02
SNRPA-205ENST00000598923 RBM28Q9NW13 759 aaKnown RBP21.45■■□□□ 1.02
SNRPA-205ENST00000598923 TMEM265A0A087WTH1 108 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 CSF2RAP15509 400 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 TMEM240Q5SV17 173 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 SEPT14Q6ZU15 432 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 TMEM199Q8N511 208 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 PPP1R12CQ9BZL4 782 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 KIAA1217Q5T5P2 1943 aa21.44■■□□□ 1.02
SNRPA-205ENST00000598923 SCN10AQ9Y5Y9 1956 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.43■■□□□ 1.02
SNRPA-205ENST00000598923 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.43■■□□□ 1.02
SNRPA-205ENST00000598923 DLL1O00548 723 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 MYCLP12524 364 aaPredicted RBP21.43■■□□□ 1.02
SNRPA-205ENST00000598923 STXBP2Q15833 593 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 RASIP1Q5U651 963 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 IWS1Q96ST2 819 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 PXMP2Q9NR77 195 aa21.43■■□□□ 1.02
SNRPA-205ENST00000598923 MAP3K20Q9NYL2 800 aaKnown RBP21.43■■□□□ 1.02
SNRPA-205ENST00000598923 NR3C2P08235 984 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 CDC27P30260 824 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 METAP2P50579 478 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNRPA-205ENST00000598923 PSMC6P62333 389 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 RUFY3Q7L099 469 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 CYP46A1Q9Y6A2 500 aa21.42■■□□□ 1.02
SNRPA-205ENST00000598923 GBF1Q92538 1859 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 B4GALT4O60513 344 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 TXNP10599 105 aaKnown RBP21.41■■□□□ 1.02
SNRPA-205ENST00000598923 CYP2C18P33260 490 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 ADD1P35611 737 aaKnown RBP21.41■■□□□ 1.02
SNRPA-205ENST00000598923 HEATR3Q7Z4Q2 680 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 SAMD3Q8N6K7 520 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 SMARCC2Q8TAQ2 1214 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 CUL5Q93034 780 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 ZFP91Q96JP5 570 aaPredicted RBP21.41■■□□□ 1.02
SNRPA-205ENST00000598923 UPF3BQ9BZI7 483 aaKnown RBP21.41■■□□□ 1.02
SNRPA-205ENST00000598923 TRPV6Q9H1D0 765 aa21.41■■□□□ 1.02
SNRPA-205ENST00000598923 V9GY48 417 aaPredicted RBP21.41■■□□□ 1.02
SNRPA-205ENST00000598923 UMODL1Q5DID0 1318 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 ACRP10323 421 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 CPT1AP50416 773 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 PURAQ00577 322 aaKnown RBP21.4■■□□□ 1.02
SNRPA-205ENST00000598923 GHRHRQ02643 423 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 TTLL4Q14679 1199 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 PPP2R5BQ15173 497 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 USP17L6PQ6QN14 398 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 OR6J1Q8NGC5 347 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 COPS5Q92905 334 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 GPKOWQ92917 476 aaPredicted RBP eCLIP21.4■■□□□ 1.02
SNRPA-205ENST00000598923 HIPK3Q9H422 1215 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 IL23AQ9NPF7 189 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 FAM217BQ9NTX9 383 aaPredicted RBP21.4■■□□□ 1.02
SNRPA-205ENST00000598923 POLR3EQ9NVU0 708 aa21.4■■□□□ 1.02
SNRPA-205ENST00000598923 CNTNAP5Q8WYK1 1306 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 NKRFO15226 690 aaKnown RBP eCLIP21.39■■□□□ 1.01
SNRPA-205ENST00000598923 EIF3JO75822 258 aaKnown RBP21.39■■□□□ 1.01
SNRPA-205ENST00000598923 DNAJB2P25686 324 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 PSRC1Q6PGN9 363 aaPredicted RBP21.39■■□□□ 1.01
SNRPA-205ENST00000598923 ZNF365Q70YC5 407 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 MYLIPQ8WY64 445 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 PDCD2LQ9BRP1 358 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
SNRPA-205ENST00000598923 NOC4LQ9BVI4 516 aaKnown RBP21.39■■□□□ 1.01
SNRPA-205ENST00000598923 PSTPIP2Q9H939 334 aa21.39■■□□□ 1.01
SNRPA-205ENST00000598923 CCDC196A0A1B0GTZ2 297 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 ARIH2O95376 493 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 CCT2P78371 535 aaKnown RBP21.38■■□□□ 1.01
SNRPA-205ENST00000598923 PGM5Q15124 567 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 LY6KQ17RY6 165 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 TM6SF1Q9BZW5 370 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 ALDH8A1Q9H2A2 487 aaPredicted RBP21.38■■□□□ 1.01
SNRPA-205ENST00000598923 PDRG1Q9NUG6 133 aa21.38■■□□□ 1.01
SNRPA-205ENST00000598923 A6NJR5 290 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 RCAN1P53805 252 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 FUT2Q10981 343 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 VSIG10LQ86VR7 867 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 FBXL16Q8N461 479 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 IL31RAQ8NI17 732 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 HERVK_113Q902F9 699 aa21.37■■□□□ 1.01
SNRPA-205ENST00000598923 MTG1Q9BT17 334 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms