RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SPC25Q9HBM1 224 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 RBM47A0AV96 593 aaKnown RBP22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 PGK1P00558 417 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 FOSP01100 380 aaPredicted RBP22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 XBP1P17861 261 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 MCM2P49736 904 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 ST3GAL1Q11201 340 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 AP3B2Q13367 1082 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 TTLL4Q14679 1199 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 VSIG10LQ86VR7 867 aa22.52■■□□□ 1.2
SHKBP1-214ENST00000597396 KBTBD13C9JR72 458 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 SMPD1P17405 629 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 GJC2Q5T442 439 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 JAKMIP3Q5VZ66 844 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 RNF180Q86T96 592 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 REXO1Q8N1G1 1221 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 ZFP91Q96JP5 570 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 PGBD1Q96JS3 809 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 ANO3Q9BYT9 981 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 AP5M1Q9H0R1 490 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 TMEM260Q9NX78 707 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 DOCK5Q9H7D0 1870 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 SYNRGQ9UMZ2 1314 aa22.51■■□□□ 1.19
SHKBP1-214ENST00000597396 JAK2O60674 1132 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 TXNP10599 105 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 CLK2P49760 499 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 LRRC41Q15345 812 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 DUSP28Q4G0W2 176 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 PCNX4Q63HM2 1172 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 MCTP2Q6DN12 878 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 NECAB2Q7Z6G3 386 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 TLK2Q86UE8 772 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 FAM177A1Q8N128 213 aaPredicted RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 DIS3LQ8TF46 1054 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 PAWRQ96IZ0 340 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 ALG1Q9BT22 464 aa22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 GNEQ9Y223 722 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-214ENST00000597396 H0YGN5 161 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 DNM1LO00429 736 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 NKRFO15226 690 aaKnown RBP eCLIP22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 STAM2O75886 525 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 CD2BP2O95400 341 aaKnown RBP22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 C6orf222P0C671 652 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 GNPTABQ3T906 1256 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 XRRA1Q6P2D8 792 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 LLPHQ9BRT6 129 aaKnown RBP22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 MRVI1Q9Y6F6 885 aa22.49■■□□□ 1.19
SHKBP1-214ENST00000597396 DYNC1LI2O43237 492 aaPredicted RBP22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 ADAMTS4O75173 837 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 FDPSP14324 419 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 GJA9P57773 515 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 MRPS9P82933 396 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 TMEM63BQ5T3F8 832 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 DPF3Q92784 378 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 UPF3AQ9H1J1 476 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 RTEL1Q9NZ71 1219 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 PCDHA4Q9UN74 947 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 Q9Y3F1 56 aa22.48■■□□□ 1.19
SHKBP1-214ENST00000597396 ARIH2O95376 493 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 MNX1P50219 401 aaPredicted RBP22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 GALNT17Q6IS24 598 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 KCNV1Q6PIU1 500 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 OR6J1Q8NGC5 347 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 RASGRP4Q8TDF6 673 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 TMX3Q96JJ7 454 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 C11orf49Q9H6J7 331 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 KCNJ14Q9UNX9 436 aa22.47■■□□□ 1.19
SHKBP1-214ENST00000597396 ADAMTS3O15072 1205 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 RGS20O76081 388 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 PTGS1P23219 599 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 FOSBP53539 338 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 HMGN5P82970 282 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 GNASQ5JWF2 1037 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 CCDC62Q6P9F0 684 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 UBE2Q1Q7Z7E8 422 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 NLRX1Q86UT6 975 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 BLIDQ8IZY5 108 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 COPS5Q92905 334 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 COLQQ9Y215 455 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 ALPK3Q96L96 1907 aa22.46■■□□□ 1.19
SHKBP1-214ENST00000597396 MYADML2A6NDP7 307 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 GH1P01241 217 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 CST5P28325 142 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 SREBF1P36956 1147 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 IRX5P78411 483 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 TRIM29Q14134 588 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 LY6KQ17RY6 165 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 PCSK9Q8NBP7 692 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 DAGLBQ8NCG7 672 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 KLHDC9Q8NEP7 349 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 INPP4AQ96PE3 977 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 HTATIP2Q9BUP3 242 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 PHF20Q9BVI0 1012 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 DDX41Q9UJV9 622 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 CEP290O15078 2479 aa22.45■■□□□ 1.18
SHKBP1-214ENST00000597396 FIBPO43427 364 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 ZNF76P36508 570 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 ARHGAP4P98171 946 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 BEX3Q00994 111 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 FSCN1Q16658 493 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms