RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
RETREG3-210ENST00000590541 GTF2IRD1Q9UHL9 959 aa20.37■□□□□ 0.85
RETREG3-210ENST00000590541 PNMA2Q9UL42 364 aa20.37■□□□□ 0.85
RETREG3-210ENST00000590541 PIEZO1Q92508 2521 aa20.36■□□□□ 0.85
RETREG3-210ENST00000590541 SSTR3P32745 418 aaPredicted RBP20.36■□□□□ 0.85
RETREG3-210ENST00000590541 PTCRAQ6ISU1 281 aaPredicted RBP20.36■□□□□ 0.85
RETREG3-210ENST00000590541 FAM117BQ6P1L5 589 aa20.36■□□□□ 0.85
RETREG3-210ENST00000590541 CRBNQ96SW2 442 aa20.36■□□□□ 0.85
RETREG3-210ENST00000590541 C17orf80Q9BSJ5 609 aa20.36■□□□□ 0.85
RETREG3-210ENST00000590541 HDAC6Q9UBN7 1215 aa20.36■□□□□ 0.85
RETREG3-210ENST00000590541 GRXCR2A6NFK2 248 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 B4DLN1 442 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 EFCAB14O75071 495 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 GH1P01241 217 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 ALADP13716 330 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 MRPL12P52815 198 aaKnown RBP20.35■□□□□ 0.85
RETREG3-210ENST00000590541 ZNF543Q08ER8 600 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 HDAC1Q13547 482 aaPredicted RBP20.35■□□□□ 0.85
RETREG3-210ENST00000590541 IKBKEQ14164 716 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 TRIM71Q2Q1W2 868 aaKnown RBP20.35■□□□□ 0.85
RETREG3-210ENST00000590541 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 WNT8BQ93098 351 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 TCP11L1Q9NUJ3 509 aa20.35■□□□□ 0.85
RETREG3-210ENST00000590541 SNHG28P0DPA3 235 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 CASTP20810 708 aaKnown RBP20.34■□□□□ 0.85
RETREG3-210ENST00000590541 MBTPS1Q14703 1052 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
RETREG3-210ENST00000590541 SEPT14Q6ZU15 432 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 CHST3Q7LGC8 479 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 FBXO22Q8NEZ5 403 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 NEK9Q8TD19 979 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
RETREG3-210ENST00000590541 TBC1D5Q92609 795 aa20.34■□□□□ 0.85
RETREG3-210ENST00000590541 MRE11P49959 708 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 PTK7Q13308 1070 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
RETREG3-210ENST00000590541 USH1GQ495M9 461 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 RRP12Q5JTH9 1297 aaKnown RBP20.33■□□□□ 0.85
RETREG3-210ENST00000590541 ZNF618Q5T7W0 954 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 C7orf31Q8N865 590 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 TOMM22Q9NS69 142 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 INSL6Q9Y581 213 aa20.33■□□□□ 0.85
RETREG3-210ENST00000590541 MX1P20591 662 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 PSEN2P49810 448 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 DGKDQ16760 1214 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 MRPL38Q96DV4 380 aaKnown RBP20.32■□□□□ 0.84
RETREG3-210ENST00000590541 TAAR1Q96RJ0 339 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 ALG1Q9BT22 464 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 COL20A1Q9P218 1284 aa20.32■□□□□ 0.84
RETREG3-210ENST00000590541 POTEB3A0JP26 581 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 H3BQ06 376 aaPredicted RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 HAS3O00219 553 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 LGR5O75473 907 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 HTRA4P83105 476 aaPredicted RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 ZNF200P98182 395 aaPredicted RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 NHLH1Q02575 133 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 ALX1Q15699 326 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 PUS10Q3MIT2 529 aaKnown RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 POTEBQ6S5H4 581 aa20.31■□□□□ 0.84
RETREG3-210ENST00000590541 SP7Q8TDD2 431 aaPredicted RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 SYTL5Q8TDW5 730 aaPredicted RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 DDX41Q9UJV9 622 aaKnown RBP20.31■□□□□ 0.84
RETREG3-210ENST00000590541 DCXO43602 365 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 F2P00734 622 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 HIC1Q14526 733 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 MFSD10Q14728 455 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 ANKRD45Q5TZF3 282 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 DBF4BQ8NFT6 615 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 NSUN6Q8TEA1 469 aaKnown RBP20.3■□□□□ 0.84
RETREG3-210ENST00000590541 EMID1Q96A84 441 aaPredicted RBP20.3■□□□□ 0.84
RETREG3-210ENST00000590541 FBXL18Q96ME1 805 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 KATNAL1Q9BW62 490 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 CTNNA3Q9UI47 895 aa20.3■□□□□ 0.84
RETREG3-210ENST00000590541 KIAA1217Q5T5P2 1943 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 FGAP02671 866 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 ZNF286BP0CG31 522 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 STXBP2Q15833 593 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 KIAA0753Q2KHM9 967 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 EPC2Q52LR7 807 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 TICAM2Q86XR7 235 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 MYOCDQ8IZQ8 938 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 TTC14Q96N46 770 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 UBA5Q9GZZ9 404 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 MAF1Q9H063 256 aa20.29■□□□□ 0.84
RETREG3-210ENST00000590541 AMHP03971 560 aa20.28■□□□□ 0.84
RETREG3-210ENST00000590541 PTPROQ16827 1216 aa20.28■□□□□ 0.84
RETREG3-210ENST00000590541 PPTC7Q8NI37 304 aa20.28■□□□□ 0.84
RETREG3-210ENST00000590541 PABPC5Q96DU9 382 aaKnown RBP20.28■□□□□ 0.84
RETREG3-210ENST00000590541 IWS1Q96ST2 819 aa20.28■□□□□ 0.84
RETREG3-210ENST00000590541 KCNH6Q9H252 994 aa20.28■□□□□ 0.84
RETREG3-210ENST00000590541 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
RETREG3-210ENST00000590541 SALL3Q9BXA9 1300 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 H3BNC9 293 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 ZP2Q05996 745 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 COL19A1Q14993 1142 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 CDC37Q16543 378 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms