RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CDK8P49336 464 aa13.73□□□□□ -0.21
PDE4A-207ENST00000590407 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
PDE4A-207ENST00000590407 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
PDE4A-207ENST00000590407 RAD54LQ92698 747 aa13.73□□□□□ -0.21
PDE4A-207ENST00000590407 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
PDE4A-207ENST00000590407 TSG101Q99816 390 aa13.73□□□□□ -0.21
PDE4A-207ENST00000590407 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
PDE4A-207ENST00000590407 MAGEA1P43355 309 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 MARSP56192 900 aaKnown RBP13.72□□□□□ -0.21
PDE4A-207ENST00000590407 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 CALCRLQ16602 461 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 ZCWPW2Q504Y3 356 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 SLC39A2Q9NP94 309 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
PDE4A-207ENST00000590407 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
PDE4A-207ENST00000590407 EPHB6O15197 1021 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 AKR1B10O60218 316 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 GNA14O95837 355 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 APBA1Q02410 837 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 ASPRV1Q53RT3 343 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 HYIQ5T013 277 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 NOX5Q96PH1 765 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 LUC7LQ9NQ29 371 aaKnown RBP13.71□□□□□ -0.21
PDE4A-207ENST00000590407 CEP72Q9P209 647 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 STIM2Q9P246 746 aa13.71□□□□□ -0.21
PDE4A-207ENST00000590407 A0A0G2JS52 829 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 LRRC53A6NM62 1247 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 MOCS3O95396 460 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 SNHG28P0DPA3 235 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GRAPQ13588 217 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.22
PDE4A-207ENST00000590407 HGSNATQ68CP4 663 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 HAUS3Q68CZ6 603 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.22
PDE4A-207ENST00000590407 C1orf131Q8NDD1 294 aaKnown RBP13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GRAPLQ8TC17 118 aaPredicted RBP13.71□□□□□ -0.22
PDE4A-207ENST00000590407 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 LRRC1Q9BTT6 524 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 TLR10Q9BXR5 811 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.22
PDE4A-207ENST00000590407 GOLGA6AQ9NYA3 693 aa13.71□□□□□ -0.22
PDE4A-207ENST00000590407 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 TRIM66O15016 1216 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 NKRFO15226 690 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDE4A-207ENST00000590407 KCNQ2O43526 872 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 EDIL3O43854 480 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 CPP00450 1065 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 SERPING1P05155 500 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 ADCY7P51828 1080 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 SKOR1P84550 965 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
PDE4A-207ENST00000590407 EMC10Q5UCC4 262 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 KRT79Q5XKE5 535 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 FOXR1Q6PIV2 292 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 RRAGAQ7L523 313 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 C10orf67Q8IYJ2 551 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 MREGQ8N565 214 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 EIF1ADQ8N9N8 165 aaKnown RBP13.7□□□□□ -0.22
PDE4A-207ENST00000590407 PIGSQ96S52 555 aa13.7□□□□□ -0.22
PDE4A-207ENST00000590407 DMGDHQ9UI17 866 aaKnown RBP13.7□□□□□ -0.22
PDE4A-207ENST00000590407 GAKO14976 1311 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 ATP8B3O60423 1300 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 BTNL10A8MVZ5 291 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 CES2O00748 559 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 ZMYND10O75800 440 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
PDE4A-207ENST00000590407 TXKP42681 527 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 USP17L2Q6R6M4 530 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE4A-207ENST00000590407 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 EFCAB13Q8IY85 973 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 MYOCDQ8IZQ8 938 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE4A-207ENST00000590407 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
PDE4A-207ENST00000590407 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
PDE4A-207ENST00000590407 COL4A3BPQ9Y5P4 624 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms