RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 MAP4K4O95819 1239 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 LDHCP07864 332 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 CYP2C8P10632 490 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 SOX18P35713 384 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 IL15P40933 162 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 FLT3LGP49771 235 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 RGS3P49796 1198 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 PRKCZQ05513 592 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 NECAB2Q7Z6G3 386 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 PRRT2Q7Z6L0 340 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 DZIP1Q86YF9 867 aaKnown RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 CLEC10AQ8IUN9 316 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 FAM20CQ8IXL6 584 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 KLHDC4Q8TBB5 520 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 FAM83CQ9BQN1 747 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 IDI2Q9BXS1 227 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 AKAP2Q9Y2D5 859 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 MKI67P46013 3256 aaKnown RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 ADGRA2Q96PE1 1338 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 HTTP42858 3142 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 PATL2C9JE40 543 aaKnown RBP6.85□□□□□ -1.31
DNMT1-220ENST00000589351 CIAO1O76071 339 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 BRD1O95696 1058 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
DNMT1-220ENST00000589351 PTPRAP18433 802 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 CTGFP29279 349 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 PRDX5P30044 214 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
DNMT1-220ENST00000589351 GSTO1P78417 241 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 DPYDQ12882 1025 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 ALDH1L2Q3SY69 923 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 SHISA4Q96DD7 197 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 MYO19Q96H55 970 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 DEFB118Q96PH6 123 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
DNMT1-220ENST00000589351 SIL1Q9H173 461 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 AS3MTQ9HBK9 375 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 AFG3L2Q9Y4W6 797 aa6.85□□□□□ -1.31
DNMT1-220ENST00000589351 TRIM75PA6NK02 468 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 C8AP07357 584 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 CDC25BP30305 580 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 MOGSQ13724 837 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 MVPQ14764 893 aaKnown RBP6.84□□□□□ -1.31
DNMT1-220ENST00000589351 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 GORABQ5T7V8 394 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 ATG9AQ7Z3C6 839 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 UBE2Q1Q7Z7E8 422 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 CCAR1Q8IX12 1150 aaKnown RBP6.84□□□□□ -1.31
DNMT1-220ENST00000589351 LACRTQ9GZZ8 138 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 OSBPL5Q9H0X9 879 aaPredicted RBP6.84□□□□□ -1.31
DNMT1-220ENST00000589351 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.84□□□□□ -1.31
DNMT1-220ENST00000589351 LRFN2Q9ULH4 789 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 GABRQQ9UN88 632 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 AGTPBP1Q9UPW5 1226 aa6.84□□□□□ -1.31
DNMT1-220ENST00000589351 MYH13Q9UKX3 1938 aa6.84□□□□□ -1.32
DNMT1-220ENST00000589351 RPTORQ8N122 1335 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 DDX3YO15523 660 aaKnown RBP6.83□□□□□ -1.32
DNMT1-220ENST00000589351 BMP3P12645 472 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 BTDP43251 543 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 RFX5P48382 616 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-220ENST00000589351 PICALMQ13492 652 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-220ENST00000589351 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 ADAMTSL4Q6UY14 1074 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 TREML1Q86YW5 311 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 ANKRD13CQ8N6S4 541 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 SSH1Q8WYL5 1049 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 COL26A1Q96A83 441 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 PAWRQ96IZ0 340 aaKnown RBP6.83□□□□□ -1.32
DNMT1-220ENST00000589351 API5Q9BZZ5 524 aaKnown RBP6.83□□□□□ -1.32
DNMT1-220ENST00000589351 KCNF1Q9H3M0 494 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 SMC4Q9NTJ3 1288 aa6.83□□□□□ -1.32
DNMT1-220ENST00000589351 GAKO14976 1311 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 PDS5AQ29RF7 1337 aaKnown RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 MGAMO43451 1857 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 DDTLA6NHG4 134 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 BAG3O95817 575 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 HMGCRP04035 888 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 GNAI3P08754 354 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 BMP8BP34820 402 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 PHKA1P46020 1223 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 TIMM10P62072 90 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 ATP11AP98196 1134 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 SPP2Q13103 211 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 PTK7Q13308 1070 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 CERS3Q8IU89 383 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 POU5F2Q8N7G0 328 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 UBASH3BQ8TF42 649 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
DNMT1-220ENST00000589351 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.82□□□□□ -1.32
DNMT1-220ENST00000589351 DHX36Q9H2U1 1008 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms