RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 CRTAC1Q9NQ79 661 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 HDAC6Q9UBN7 1215 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 ZNF510Q9Y2H8 683 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 SHROOM2Q13796 1616 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 AATKQ6ZMQ8 1374 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 TMEM221A6NGB7 291 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 EDN3P14138 238 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 ATP4AP20648 1035 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 HTR3AP46098 478 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 PAPOLAP51003 745 aaKnown RBP6.29□□□□□ -1.4
LINC01538-201ENST00000588074 USP11P51784 963 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 PICALMQ13492 652 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 LONRF2Q1L5Z9 754 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
LINC01538-201ENST00000588074 PARP10Q53GL7 1025 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 SYDE2Q5VT97 1194 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 RNF219Q5W0B1 726 aaPredicted RBP6.29□□□□□ -1.4
LINC01538-201ENST00000588074 OLFML1Q6UWY5 402 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 KLHL6Q8WZ60 621 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 LZICQ8WZA0 190 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 GAL3ST3Q96A11 431 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 SH3GL1Q99961 368 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 GORASP1Q9BQQ3 440 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 SLC12A5Q9H2X9 1139 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 EHMT1Q9H9B1 1298 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 L2HGDHQ9H9P8 463 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 ATP6V0A2Q9Y487 856 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 GMEB1Q9Y692 573 aa6.29□□□□□ -1.4
LINC01538-201ENST00000588074 RNF8O76064 485 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 DESP17661 470 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 MAN1A1P33908 653 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 ZNF132P52740 706 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 MECOMQ03112 1051 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 TYRO3Q06418 890 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CUL3Q13618 768 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 KCNB1Q14721 858 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 PTPN21Q16825 1174 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 TPD52L1Q16890 204 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CAPRIN2Q6IMN6 1127 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 XRRA1Q6P2D8 792 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 FGD2Q7Z6J4 655 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 DHTKD1Q96HY7 919 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 PARD6BQ9BYG5 372 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CEP44Q9C0F1 390 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 NRDE2Q9H7Z3 1164 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 E2F8A0AVK6 867 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 PPFIA3O75145 1194 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 MTRF1O75570 445 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 BBOX1O75936 387 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 FSBPO95073 299 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 TBC1D8O95759 1140 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CASTP20810 708 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 BMP6P22004 513 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 ECE1P42892 770 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CCDC158Q5M9N0 1113 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 KIAA1211LQ6NV74 962 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 UBE2Q1Q7Z7E8 422 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 LRRC47Q8N1G4 583 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 NGDNQ8NEJ9 315 aaKnown RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 OSMRQ99650 979 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CORO1BQ9BR76 489 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 C9orf78Q9NZ63 289 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 FNIP2Q9P278 1114 aa6.28□□□□□ -1.4
LINC01538-201ENST00000588074 CORO1CQ9ULV4 474 aaPredicted RBP6.28□□□□□ -1.4
LINC01538-201ENST00000588074 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 EIF3FO00303 357 aaPredicted RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 NEMFO60524 1076 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 DNAJA2O60884 412 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 SASH3O75995 380 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 ATICP31939 592 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 SLC8A1P32418 973 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 GRIA2P42262 883 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 RELBQ01201 579 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 RASSF7Q02833 373 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 PDE4BQ07343 736 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 DYNC1I2Q13409 638 aaKnown RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 CUL4BQ13620 913 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 KCTD2Q14681 263 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 MYBPC3Q14896 1274 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 PLCB4Q15147 1175 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 TJAP1Q5JTD0 557 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 NUGGCQ68CJ6 796 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 NYAP1Q6ZVC0 841 aa6.27□□□□□ -1.41
LINC01538-201ENST00000588074 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.41
LINC01538-201ENST00000588074 DZIP1Q86YF9 867 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms