RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 ANKS1AQ92625 1134 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 CD320Q9NPF0 282 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 DDX41Q9UJV9 622 aaKnown RBP13.93□□□□□ -0.18
BRCA1-225ENST00000586385 COG5Q9UP83 839 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 NOD1Q9Y239 953 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 KIF28PB7ZC32 967 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 HAS3O00219 553 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 RGS20O76081 388 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 CKBP12277 381 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 HOXD8P13378 290 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-225ENST00000586385 ZNF200P98182 395 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-225ENST00000586385 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-225ENST00000586385 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 TICAM2Q86XR7 235 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 PNMA1Q8ND90 353 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
BRCA1-225ENST00000586385 HLA-CQ95604 372 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 MPHOSPH6Q99547 160 aaKnown RBP13.92□□□□□ -0.18
BRCA1-225ENST00000586385 LRFN3Q9BTN0 628 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 C1QTNF1Q9BXJ1 281 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 SUGCTQ9HAC7 445 aa13.92□□□□□ -0.18
BRCA1-225ENST00000586385 COL4A4P53420 1690 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 ABCB11O95342 1321 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 BRWD1Q9NSI6 2320 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 LINC01553A4QN01 128 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 KDM4AO75164 1064 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 GJB5O95377 273 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 F2P00734 622 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 ZNF286BP0CG31 522 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 EIF2AK2P19525 551 aaKnown RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 SDSP20132 328 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 KCNJ6P48051 423 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 PSEN2P49810 448 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 RRP1P56182 461 aaKnown RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 CNKSR3Q6P9H4 555 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 ENAHQ8N8S7 591 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 ESR2Q92731 530 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-225ENST00000586385 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 MAF1Q9H063 256 aa13.91□□□□□ -0.18
BRCA1-225ENST00000586385 B4DLN1 442 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 B4E1Z4 1266 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 NR3C2P08235 984 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
BRCA1-225ENST00000586385 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
BRCA1-225ENST00000586385 ERVK-21P61565 698 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 GHRHRQ02643 423 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 MFSD10Q14728 455 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 STXBP2Q15833 593 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 DGKDQ16760 1214 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 ZNF618Q5T7W0 954 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 CCDC155Q8N6L0 562 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 IL31RAQ8NI17 732 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 PXMP2Q9NR77 195 aa13.9□□□□□ -0.18
BRCA1-225ENST00000586385 TRIP12Q14669 1992 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-225ENST00000586385 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
BRCA1-225ENST00000586385 HSD17B4P51659 736 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 PTK7Q13308 1070 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 ASPRV1Q53RT3 343 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.192e-8■■■■■ 27.8
BRCA1-225ENST00000586385 STAG2Q8N3U4 1231 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 PPTC7Q8NI37 304 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
BRCA1-225ENST00000586385 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-225ENST00000586385 RAD9AQ99638 391 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 OSBPL7Q9BZF2 842 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
BRCA1-225ENST00000586385 LMCD1Q9NZU5 365 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 ZSWIM5Q9P217 1185 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
BRCA1-225ENST00000586385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-225ENST00000586385 ZNF213O14771 459 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 SORBS3O60504 671 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-225ENST00000586385 SP2Q02086 613 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 ARHGEF16Q5VV41 709 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 FAM117BQ6P1L5 589 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 C7orf31Q8N865 590 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms