RNA–Protein interactions for RNA: ENST00000585101.5

ATPAF2-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 4 BASIC

Gene ATPAF2, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-213ENST00000585101 SGMS1Q86VZ5 419 aa20.32■□□□□ 0.84
ATPAF2-213ENST00000585101 SLC43A3Q8NBI5 491 aa20.32■□□□□ 0.84
ATPAF2-213ENST00000585101 TRMT13Q9NUP7 481 aaKnown RBP20.32■□□□□ 0.84
ATPAF2-213ENST00000585101 POLR3EQ9NVU0 708 aa20.32■□□□□ 0.84
ATPAF2-213ENST00000585101 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
ATPAF2-213ENST00000585101 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 EIF3JO75822 258 aaKnown RBP20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 TIMP1P01033 207 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 GH1P01241 217 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 CD4P01730 458 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 CALM1P0DP23 149 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 CALM2P0DP24 149 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 CALM3P0DP25 149 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 GNAQP50148 359 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 FPGSQ05932 587 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 NBPF20Q3BBV1 942 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 LRIT3Q3SXY7 679 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 TSGA10IPQ3SY00 556 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 BCAS3Q9H6U6 928 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 DDX41Q9UJV9 622 aaKnown RBP20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 SCN10AQ9Y5Y9 1956 aa20.31■□□□□ 0.84
ATPAF2-213ENST00000585101 A6NJR5 290 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 ACRP10323 421 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 HSPA4P34932 840 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 UBE2SQ16763 222 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 Q6ZUG5 572 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 VSIG10LQ86VR7 867 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 MTG1Q9BT17 334 aaPredicted RBP20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 MAF1Q9H063 256 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 RTEL1Q9NZ71 1219 aa20.3■□□□□ 0.84
ATPAF2-213ENST00000585101 ZBTB43O43298 467 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 MMP3P08254 477 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 CYP2C9P11712 490 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 CSF2RAP15509 400 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 CCND2P30279 289 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 CCL23P55773 120 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 FGD1P98174 961 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 SP2Q02086 613 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 TRAF1Q13077 416 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 KRT32Q14532 448 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 RTN1Q16799 776 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 HEATR3Q7Z4Q2 680 aa20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 ALDH8A1Q9H2A2 487 aaPredicted RBP20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 MAP3K20Q9NYL2 800 aaKnown RBP20.29■□□□□ 0.84
ATPAF2-213ENST00000585101 CNTNAP5Q8WYK1 1306 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 SCN5AQ14524 2016 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 GOLGA8AA7E2F4 631 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 GOLGA8BA8MQT2 603 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 MEIS2O14770 477 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 PPFIA3O75145 1194 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 SMARCA1P28370 1054 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 CDC27P30260 824 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 MRPS9P82933 396 aaKnown RBP20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 BRDTQ58F21 947 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 MFSD5Q6N075 450 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 KCNB2Q92953 911 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 FAM161BQ96MY7 647 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 HIPK3Q9H422 1215 aa20.28■□□□□ 0.84
ATPAF2-213ENST00000585101 ZNF286BP0CG31 522 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 C16orf59Q7L2K0 433 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 DEFB123Q8N688 67 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 BRF1Q92994 677 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 CUL5Q93034 780 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 SCLYQ96I15 445 aa20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 RNPC3Q96LT9 517 aaKnown RBP20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.84
ATPAF2-213ENST00000585101 REC8O95072 547 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 GGPS1O95749 300 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 CASTP20810 708 aaKnown RBP20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 WWC2Q6AWC2 1192 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 SAMD3Q8N6K7 520 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 KAT2BQ92831 832 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 NOC4LQ9BVI4 516 aaKnown RBP20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 TELO2Q9Y4R8 837 aa20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 TRIP12Q14669 1992 aaPredicted RBP20.26■□□□□ 0.83
ATPAF2-213ENST00000585101 ADD1P35611 737 aaKnown RBP20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 FUT2Q10981 343 aa20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 TYW1BQ6NUM6 668 aa20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 PGBD1Q96JS3 809 aa20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 SPATA33Q96N06 139 aa20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
ATPAF2-213ENST00000585101 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
ATPAF2-213ENST00000585101 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
ATPAF2-213ENST00000585101 RPS6KB1P23443 525 aa20.24■□□□□ 0.83
ATPAF2-213ENST00000585101 SEMA3FQ13275 785 aa20.24■□□□□ 0.83
ATPAF2-213ENST00000585101 HSDL1Q3SXM5 330 aa20.24■□□□□ 0.83
ATPAF2-213ENST00000585101 CELF3Q5SZQ8 465 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms