RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
PPP4R1-220ENST00000581835 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 A6NJR5 290 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 ARVCFO00192 962 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 CLTBP09497 229 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 CPT1AP50416 773 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.524e-7■■□□□ 11.4
PPP4R1-220ENST00000581835 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 DDX41Q9UJV9 622 aaKnown RBP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 V9GY48 417 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 GRIN2DO15399 1336 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
PPP4R1-220ENST00000581835 NID2Q14112 1375 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 CCDC196A0A1B0GTZ2 297 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 DCDC2CA8MYV0 355 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 GH1P01241 217 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 CCND2P30279 289 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 EVCP57679 992 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 PURAQ00577 322 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 ARHGAP1Q07960 439 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 FAM126BQ8IXS8 530 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 CUL5Q93034 780 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 MRVI1Q9Y6F6 885 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 LAMA2P24043 3122 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-220ENST00000581835 KIAA0355O15063 1070 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 CD4P01730 458 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 MYL3P08590 195 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 ITGB8P26012 769 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 PDIA3P30101 505 aaKnown RBP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 FXR1P51114 621 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 PSMC6P62333 389 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 KCNV1Q6PIU1 500 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 AFG1LQ8WV93 481 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 BADQ92934 168 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 SEZ6LQ9BYH1 1024 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 UPF3BQ9BZI7 483 aaKnown RBP11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
PPP4R1-220ENST00000581835 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 KPNA6O60684 536 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 STAM2O75886 525 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 MMP3P08254 477 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 TGFB3P10600 412 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 NAPAP54920 295 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 SP2Q02086 613 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 NTRK3Q16288 839 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 UBE2SQ16763 222 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 PCNX4Q63HM2 1172 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 TDHQ8IZJ6 230 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 INPP4AQ96PE3 977 aaPredicted RBP11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 RTEL1Q9NZ71 1219 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 TBX21Q9UL17 535 aa11.8□□□□□ -0.52
PPP4R1-220ENST00000581835 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 STXBP3O00186 592 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 TIMP1P01033 207 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 RAG1P15918 1043 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 ICAM3P32942 547 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 CCT2P78371 535 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 SEMA3FQ13275 785 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 CELF3Q5SZQ8 465 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 PPP1R18Q6NYC8 613 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 XRRA1Q6P2D8 792 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 DHX37Q8IY37 1157 aaKnown RBP11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
PPP4R1-220ENST00000581835 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PPP4R1-220ENST00000581835 SPDYE3A6NKU9 549 aa11.78□□□□□ -0.52
PPP4R1-220ENST00000581835 SPATA31C2B4DYI2 1134 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms