RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 DDX12PQ92771 950 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 GGCXP38435 758 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 PPP2R5DQ14738 602 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 SGMS1Q86VZ5 419 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 VPS37BQ9H9H4 285 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 GNA14O95837 355 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 CLNS1AP54105 237 aaKnown RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 C6orf163Q5TEZ5 329 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 KAZNQ674X7 775 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 ANKRD7Q92527 254 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 BHMT2Q9H2M3 363 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 E9PMD0 336 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-206ENST00000578373 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-206ENST00000578373 JDP2Q8WYK2 163 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-206ENST00000578373 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 KRT19P08727 400 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 ADCY8P40145 1251 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 EPHB4P54760 987 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
ERBB2-206ENST00000578373 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 STX2P32856 288 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 TRIP13Q15645 432 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 ARHGEF2Q92974 986 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 AK8Q96MA6 479 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 PCK1P35558 622 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 LRRN4CLQ8ND94 238 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 NPHP4O75161 1426 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 PALMO75781 387 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 TDP2O95551 362 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 FAM186BQ8IYM0 893 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 TCP11Q8WWU5 503 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 USP21Q9UK80 565 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
ERBB2-206ENST00000578373 ZNF335Q9H4Z2 1342 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-206ENST00000578373 TRIM66O15016 1216 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 HHATQ5VTY9 493 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 NOA1Q8NC60 698 aaKnown RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 RSRC1Q96IZ7 334 aaKnown RBP13.15□□□□□ -0.3
ERBB2-206ENST00000578373 MMS19Q96T76 1030 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
ERBB2-206ENST00000578373 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms