RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 BFSP2Q13515 415 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 LY6KQ17RY6 165 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 SEPT14Q6ZU15 432 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 SESTD1Q86VW0 696 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 AFG1LQ8WV93 481 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 VAT1LQ9HCJ6 419 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 KIAA1217Q5T5P2 1943 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 MUC3AQ02505 3323 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 RFXAPO00287 272 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 GTPBP6O43824 516 aaPredicted RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 EIF3JO75822 258 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 MMP3P08254 477 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 CASTP20810 708 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 GHRHRQ02643 423 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 PTGISQ16647 500 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 IFIT1BQ5T764 474 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 ARHGEF16Q5VV41 709 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 ERICH6BQ5W0A0 696 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 PHOSPHO2Q8TCD6 241 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 ADAMTS19Q8TE59 1207 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 EMID1Q96A84 441 aaPredicted RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 ASB2Q96Q27 587 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 AMNQ9BXJ7 453 aa14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 MAP3K20Q9NYL2 800 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-207ENST00000578234 MYH7BA7E2Y1 1941 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 KLRF2D3W0D1 207 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 TRANK1O15050 2925 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 CFBP00751 764 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 NR3C2P08235 984 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 HSD17B4P51659 736 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 SEC23AQ15436 765 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 STAG2Q8N3U4 1231 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 CAGE1Q8TC20 777 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 MTMR8Q96EF0 704 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 SLC9A7Q96T83 725 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 UHRF1Q96T88 793 aaPredicted RBP14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
SMARCD2-207ENST00000578234 KIF28PB7ZC32 967 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 OPLAHO14841 1288 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 CA3P07451 260 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 COL9A1P20849 921 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 DGKDQ16760 1214 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 CCDC155Q8N6L0 562 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 TET1Q8NFU7 2136 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 AFAP1L1Q8TED9 768 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 ARNTL2Q8WYA1 636 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 KAT2BQ92831 832 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 CTAGE1Q96RT6 745 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 ZBED2Q9BTP6 218 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 IL25Q9H293 177 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 REV3LO60673 3130 aa14.61□□□□□ -0.07
SMARCD2-207ENST00000578234 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 ZBTB5O15062 677 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 BAIAP3O94812 1187 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 PARNO95453 639 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 GSPT1P15170 499 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 POU3F3P20264 500 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 KCNJ6P48051 423 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 RBL2Q08999 1139 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 TRAF1Q13077 416 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 LAMC2Q13753 1193 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 GDF6Q6KF10 455 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 STOX1Q6ZVD7 989 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 ALG1Q9BT22 464 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 GTF2IRD1Q9UHL9 959 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 MAD2L2Q9UI95 211 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
SMARCD2-207ENST00000578234 SORBS3O60504 671 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 PPP1R11O60927 126 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 TFF2Q03403 129 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 TRDNQ13061 729 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 KCNV1Q6PIU1 500 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 HERC6Q8IVU3 1022 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 NECAB3Q96P71 396 aaPredicted RBP14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 PDCD2LQ9BRP1 358 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 KATNAL1Q9BW62 490 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 RAPGEFL1Q9UHV5 662 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 PCDHA1Q9Y5I3 950 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 MRVI1Q9Y6F6 885 aa14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 PRRC2BQ5JSZ5 2229 aaKnown RBP14.59□□□□□ -0.07
SMARCD2-207ENST00000578234 HAS3O00219 553 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 PPFIA4O75335 1185 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 RGS20O76081 388 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 F2P00734 622 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 TGFB3P10600 412 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 SELPP16109 830 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 GPNMBQ14956 572 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 MYSM1Q5VVJ2 828 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 LRRC8DQ7L1W4 858 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 VSIG10LQ86VR7 867 aa14.58□□□□□ -0.08
SMARCD2-207ENST00000578234 C7orf31Q8N865 590 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms