RNA–Protein interactions for RNA: ENST00000577887.1

SNORD53B-201, Transcript of small nucleolar RNA, C/D box 53B, humanhuman

BASIC

Gene SNORD53B, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53B-201ENST00000577887 POTEEQ6S8J3 1075 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 LRRC8DQ7L1W4 858 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 SH3RF1Q7Z6J0 888 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 FCHSD1Q86WN1 690 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 DGKHQ86XP1 1220 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 HOMER1Q86YM7 354 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 CLEC10AQ8IUN9 316 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 HERC6Q8IVU3 1022 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 FAM126BQ8IXS8 530 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 EXOC8Q8IYI6 725 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 HACE1Q8IYU2 909 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 FIBCD1Q8N539 461 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 USP38Q8NB14 1042 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PNMA1Q8ND90 353 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 RGS22Q8NE09 1264 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 KLHDC9Q8NEP7 349 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TRPV1Q8NER1 839 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PPTC7Q8NI37 304 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 KCNG4Q8TDN1 519 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 ZNF384Q8TF68 577 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 CCDC12Q8WUD4 166 aaPredicted RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 AFG1LQ8WV93 481 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 ATP6V0A1Q93050 837 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 OSBP2Q969R2 916 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 MKL1Q969V6 931 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 LENG1Q96BZ8 264 aaPredicted RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 IL17RAQ96F46 866 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 SCLYQ96I15 445 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 AGBL1Q96MI9 1066 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 FAM193BQ96PV7 902 aaPredicted RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 MAP7D2Q96T17 732 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 LZTS2Q9BRK4 669 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 FTHL17Q9BXU8 183 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 IFIH1Q9BYX4 1025 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PUS7LQ9H0K6 701 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TRPV6Q9H1D0 765 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 UPF3AQ9H1J1 476 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 KCNH6Q9H252 994 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 NSUN3Q9H649 340 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TUT1Q9H6E5 874 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 CERS4Q9HA82 394 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 A1CFQ9NQ94 594 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 ZBTB40Q9NUA8 1239 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TCP11L1Q9NUJ3 509 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TRMT13Q9NUP7 481 aaKnown RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 CLDND1Q9NY35 253 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 STK39Q9UEW8 545 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PRKAG3Q9UGI9 489 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 DPP7Q9UHL4 492 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TBX21Q9UL17 535 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 MTUS1Q9ULD2 1270 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 TRPC6Q9Y210 931 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 GINS2Q9Y248 185 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 ARIH1Q9Y4X5 557 aaPredicted RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 SAMM50Q9Y512 469 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PCDHB7Q9Y5E2 793 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PTPRZ1P23471 2315 aaPredicted RBP1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PHIPQ8WWQ0 1821 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 WDR19Q8NEZ3 1342 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 NRCAMQ92823 1304 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 CDK5RAP2Q96SN8 1893 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 PTPRFP10586 1907 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 SMCHD1A6NHR9 2005 aa1.81□□□□□ -2.12
SNORD53B-201ENST00000577887 LAMA2P24043 3122 aaKnown RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 A0A1B0GUL6 1792 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 PLXNB2O15031 1838 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 NAV1Q8NEY1 1877 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 SZT2Q5T011 3432 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 DNAJC25-GNG10A0A024R161 153 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 PNMA6FA0A0J9YX94 578 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 PALM3A6NDB9 673 aaPredicted RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 GRXCR1A8MXD5 290 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 PRR33A8MZF0 331 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 SMIM22K7EJ46 135 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 M0R2C6 588 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 CPLX1O14810 134 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 ZBTB5O15062 677 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 GPR182O15218 404 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 MAFGO15525 162 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 FIBPO43427 364 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 DCXO43602 365 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 SMARCA5O60264 1052 aaPredicted RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 DKC1O60832 514 aaKnown RBP eCLIP1.8□□□□□ -2.12not detected■□□□□ 8.2
SNORD53B-201ENST00000577887 KDM4AO75164 1064 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 LGR5O75473 907 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 CSPG5O95196 566 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 GGPS1O95749 300 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 SNAI1O95863 264 aaPredicted RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 FOSP01100 380 aaPredicted RBP1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 CD4P01730 458 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 FGAP02671 866 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 RB1P06400 928 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 NEFLP07196 543 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 NR3C2P08235 984 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 MMP3P08254 477 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 CTSHP09668 335 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 IQCF3P0C7M6 154 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 ZNF286BP0CG31 522 aa1.8□□□□□ -2.12
SNORD53B-201ENST00000577887 GOLGA8HP0CJ92 632 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms