RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 MDM2Q00987 491 aaPredicted RBP30.41■■■□□ 2.46
PPP4R1-204ENST00000577393 GPKOWQ92917 476 aaPredicted RBP eCLIP30.41■■■□□ 2.462e-8■■■□□ 16.3
PPP4R1-204ENST00000577393 TOX2Q96NM4 488 aa30.41■■■□□ 2.46
PPP4R1-204ENST00000577393 TM6SF1Q9BZW5 370 aa30.41■■■□□ 2.46
PPP4R1-204ENST00000577393 PSTPIP2Q9H939 334 aa30.41■■■□□ 2.46
PPP4R1-204ENST00000577393 KIAA1217Q5T5P2 1943 aa30.41■■■□□ 2.46
PPP4R1-204ENST00000577393 RGS20O76081 388 aa30.4■■■□□ 2.46
PPP4R1-204ENST00000577393 CCND2P30279 289 aa30.4■■■□□ 2.46
PPP4R1-204ENST00000577393 BMP8BP34820 402 aa30.4■■■□□ 2.46
PPP4R1-204ENST00000577393 DDX41Q9UJV9 622 aaKnown RBP30.4■■■□□ 2.46
PPP4R1-204ENST00000577393 CCDC196A0A1B0GTZ2 297 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 TRIM43BA6NCK2 446 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 DCDC2CA8MYV0 355 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 CLTBP09497 229 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 WWC2Q6AWC2 1192 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 TRIM43Q96BQ3 446 aaPredicted RBP30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 ZFP91Q96JP5 570 aaPredicted RBP30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 LBHD1Q9BQE6 289 aaPredicted RBP30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 POLR3EQ9NVU0 708 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 MRVI1Q9Y6F6 885 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 FRMPD4Q14CM0 1322 aa30.39■■■□□ 2.46
PPP4R1-204ENST00000577393 A6NJR5 290 aa30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 MYL3P08590 195 aa30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 FAAP100Q0VG06 881 aa30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 BRDTQ58F21 947 aaPredicted RBP30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 UPF3BQ9BZI7 483 aaKnown RBP30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 MROH7Q68CQ1 1323 aa30.38■■■□□ 2.45
PPP4R1-204ENST00000577393 SLC34A2O95436 690 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 GH1P01241 217 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 EVCP57679 992 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 PURAQ00577 322 aaKnown RBP30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 ITGA7Q13683 1181 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 TOB2Q14106 344 aaPredicted RBP30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 SLC43A3Q8NBI5 491 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 GRIN2DO15399 1336 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 NID2Q14112 1375 aa30.37■■■□□ 2.45
PPP4R1-204ENST00000577393 PSMC6P62333 389 aa30.36■■■□□ 2.45
PPP4R1-204ENST00000577393 ARHGAP1Q07960 439 aa30.36■■■□□ 2.45
PPP4R1-204ENST00000577393 UBE2OQ9C0C9 1292 aaKnown RBP30.36■■■□□ 2.45
PPP4R1-204ENST00000577393 TMEM39AQ9NV64 488 aa30.36■■■□□ 2.45
PPP4R1-204ENST00000577393 A0A1W2PPC1 479 aa30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 PDIA3P30101 505 aaKnown RBP30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 MRPS9P82933 396 aaKnown RBP30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 UBE2SQ16763 222 aa30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 TYW1BQ6NUM6 668 aa30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 KCNV1Q6PIU1 500 aa30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 AFG1LQ8WV93 481 aa30.35■■■□□ 2.45
PPP4R1-204ENST00000577393 KIAA0355O15063 1070 aa30.34■■■□□ 2.45
PPP4R1-204ENST00000577393 NAPAP54920 295 aa30.34■■■□□ 2.45
PPP4R1-204ENST00000577393 FAM126BQ8IXS8 530 aa30.34■■■□□ 2.45
PPP4R1-204ENST00000577393 MTG1Q9BT17 334 aaPredicted RBP30.34■■■□□ 2.45
PPP4R1-204ENST00000577393 STXBP3O00186 592 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 KPNA6O60684 536 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 ITGB8P26012 769 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 PPP1R18Q6NYC8 613 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 BADQ92934 168 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 PDRG1Q9NUG6 133 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 BARHL2Q9NY43 387 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 RTEL1Q9NZ71 1219 aa30.33■■■□□ 2.45
PPP4R1-204ENST00000577393 LTBP2Q14767 1821 aa30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 hCG_1984214I3L0E3 225 aa30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 STAM2O75886 525 aa30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 CCT2P78371 535 aaKnown RBP30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 PCNX4Q63HM2 1172 aa30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 DHX37Q8IY37 1157 aaKnown RBP30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 ZNF713Q8N859 430 aaPredicted RBP30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 EMID1Q96A84 441 aaPredicted RBP30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 LARP6Q9BRS8 491 aaKnown RBP30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 SEZ6LQ9BYH1 1024 aa30.32■■■□□ 2.44
PPP4R1-204ENST00000577393 TLR3O15455 904 aaKnown RBP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 EIF5BO60841 1220 aaKnown RBP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 MMP3P08254 477 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 TGFB3P10600 412 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 FXR1P51114 621 aaKnown RBP eCLIP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 ANAPC15P60006 121 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 SP2Q02086 613 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 LAMC2Q13753 1193 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 PFKFB3Q16875 520 aaPredicted RBP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 XRRA1Q6P2D8 792 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 INPP4AQ96PE3 977 aaPredicted RBP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 NCOA5Q9HCD5 579 aaKnown RBP30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 RIC8AQ9NPQ8 531 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 TBX21Q9UL17 535 aa30.31■■■□□ 2.44
PPP4R1-204ENST00000577393 SPDYE3A6NKU9 549 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 PRPF3O43395 683 aaKnown RBP30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 CD4P01730 458 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 RAG1P15918 1043 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 NTRK3Q16288 839 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 GNPTABQ3T906 1256 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 PHKBQ93100 1093 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 PCDHA6Q9UN73 950 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 PCDHA8Q9Y5H6 950 aa30.3■■■□□ 2.44
PPP4R1-204ENST00000577393 SMCO2A6NFE2 343 aa30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 SORBS3O60504 671 aa30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 SEC24BO95487 1268 aa30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 SCG2P13521 617 aa30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 UBA1P22314 1058 aaKnown RBP30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 ADCY7P51828 1080 aa30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 CELF3Q5SZQ8 465 aaKnown RBP30.29■■■□□ 2.44
PPP4R1-204ENST00000577393 TDHQ8IZJ6 230 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms