RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 DOCK3Q8IZD9 2030 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ESPNB1AK53 854 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 GDF9O60383 454 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ZBED4O75132 1171 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 GNRH1P01148 92 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 IGHA2P01877 340 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 PGK2P07205 417 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 CASTP20810 708 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 CYP2B6P20813 491 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ADORA2AP29274 412 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 LIFRP42702 1097 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 SOX10P56693 466 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 MTFR1Q15390 333 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ASPRV1Q53RT3 343 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 Q6ZUG5 572 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 SGMS1Q86VZ5 419 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 COA7Q96BR5 231 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 FGD4Q96M96 766 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ASTN1O14525 1302 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 WDR19Q8NEZ3 1342 aa11.03□□□□□ -0.64
NPLOC4-219ENST00000576713 ERICH2A1L162 156 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 NFIBO00712 420 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 ADCY3O60266 1144 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 DTNBO60941 627 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 GRM5P41594 1212 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 CCNA1P78396 465 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 KRT32Q14532 448 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 APOA5Q6Q788 366 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 BLOC1S2Q6QNY1 142 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 SRBD1Q8N5C6 995 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 RAET1EQ8TD07 263 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 NUP133Q8WUM0 1156 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 CLEC4DQ8WXI8 215 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 BRF1Q92994 677 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 ARMC5Q96C12 935 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 MTMR8Q96EF0 704 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 IL17RAQ96F46 866 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 KIF2CQ99661 725 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 AGXT2Q9BYV1 514 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 MROH8Q9H579 483 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.65
NPLOC4-219ENST00000576713 LCTP09848 1927 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 DNAJC25-GNG10A0A024R161 153 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 KLF18A0A0U1RQI7 1052 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 CCDC69A6NI79 296 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 SLC15A5A6NIM6 579 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 OPLAHO14841 1288 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 DDAH1O94760 285 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 SLC25A27O95847 323 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 ICAM1P05362 532 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 HOXC6P09630 235 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 ALAS1P13196 640 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 CDC27P30260 824 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 GRK4P32298 578 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 OAZ1P54368 228 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 PRMT2P55345 433 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 QRICH1Q2TAL8 776 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 SLC9C1Q4G0N8 1177 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 CATIPQ7Z7H3 387 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 PIBF1Q8WXW3 757 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 TBC1D5Q92609 795 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 PIGSQ96S52 555 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 CCPG1Q9ULG6 757 aa11.01□□□□□ -0.65
NPLOC4-219ENST00000576713 ATP9BO43861 1147 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 INHAP05111 366 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 HOXD10P28358 340 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 CYP2C19P33261 490 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 CNTN2Q02246 1040 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
NPLOC4-219ENST00000576713 ZNF792Q3KQV3 632 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 USH1GQ495M9 461 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms