RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 STXBP2Q15833 593 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 LY6KQ17RY6 165 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 ESR2Q92731 530 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 FAM227BQ96M60 508 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 IWS1Q96ST2 819 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 CRBNQ96SW2 442 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 RAD9AQ99638 391 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 GTF2IRD1Q9UHL9 959 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 NT5C2P49902 561 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 DEFB103AP81534 67 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 IKBKEQ14164 716 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 DGKHQ86XP1 1220 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 KAT2BQ92831 832 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 EMID1Q96A84 441 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 TGS1Q96RS0 853 aaKnown RBP13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 RMDN3Q96TC7 470 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 MYH6P13533 1939 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
CTDNEP1-212ENST00000576613 GPR37L1O60883 481 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 NBNO60934 754 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 PSEN2P49810 448 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 PDE1AP54750 535 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 ERVK-21P61565 698 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 PTK7Q13308 1070 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 GPNMBQ14956 572 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 CCDC178Q5BJE1 867 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 SYTL5Q8TDW5 730 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 TAAR1Q96RJ0 339 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 LAMA4Q16363 1823 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
CTDNEP1-212ENST00000576613 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 F2P00734 622 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 LAMC2Q13753 1193 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 MFSD10Q14728 455 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 PPTC7Q8NI37 304 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 ZKSCAN3Q9BRR0 538 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 ALG1Q9BT22 464 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 UBE2ZQ9H832 354 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 COL20A1Q9P218 1284 aa13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-212ENST00000576613 ZNF213O14771 459 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 ZNF286BP0CG31 522 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 EIF2AK2P19525 551 aaKnown RBP13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 FBXO11Q86XK2 927 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 TBC1D5Q92609 795 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 NEDD4P46934 1319 aa13.59□□□□□ -0.23
CTDNEP1-212ENST00000576613 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 PI4K2BG5E9Z4 385 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 HAS3O00219 553 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 LGR5O75473 907 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 AMHP03971 560 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 ZNF618Q5T7W0 954 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 KCNV1Q6PIU1 500 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 PXMP2Q9NR77 195 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 CTNNA3Q9UI47 895 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 MYH7BA7E2Y1 1941 aa13.58□□□□□ -0.24
CTDNEP1-212ENST00000576613 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 KDM4AO75164 1064 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 PPFIA4O75335 1185 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 CFBP00751 764 aa13.57□□□□□ -0.24
CTDNEP1-212ENST00000576613 NR3C2P08235 984 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms