RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 VWCEQ96DN2 955 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 SCLYQ96I15 445 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
LITAF-219ENST00000576334 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
LITAF-219ENST00000576334 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 B4DLN1 442 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
LITAF-219ENST00000576334 CDC45O75419 566 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 EIF3JO75822 258 aaKnown RBP13.77□□□□□ -0.21
LITAF-219ENST00000576334 DDAH1O94760 285 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
LITAF-219ENST00000576334 SP2Q02086 613 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 PGM5Q15124 567 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
LITAF-219ENST00000576334 KAT2BQ92831 832 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
LITAF-219ENST00000576334 TTYH1Q9H313 450 aaPredicted RBP13.77□□□□□ -0.21
LITAF-219ENST00000576334 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
LITAF-219ENST00000576334 GCOM1H8Y6P7 765 aaPredicted RBP13.76□□□□□ -0.21
LITAF-219ENST00000576334 GH1P01241 217 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 MMP3P08254 477 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 CXXC1Q9P0U4 656 aaPredicted RBP13.76□□□□□ -0.21
LITAF-219ENST00000576334 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
LITAF-219ENST00000576334 ZNF286BP0CG31 522 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 PBX2P40425 430 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 LIFRP42702 1097 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
LITAF-219ENST00000576334 PPIGQ13427 754 aaKnown RBP eCLIP13.75□□□□□ -0.21
LITAF-219ENST00000576334 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
LITAF-219ENST00000576334 NEK1Q96PY6 1258 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 CTAGE1Q96RT6 745 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 MAP3K14Q99558 947 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 MAF1Q9H063 256 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
LITAF-219ENST00000576334 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
LITAF-219ENST00000576334 GBF1Q92538 1859 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 MEIS2O14770 477 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 KIF5BP33176 963 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
LITAF-219ENST00000576334 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
LITAF-219ENST00000576334 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 ZNF697Q5TEC3 545 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 OTOP2Q7RTS6 562 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
LITAF-219ENST00000576334 FANCBQ8NB91 859 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 IL23AQ9NPF7 189 aa13.74□□□□□ -0.21
LITAF-219ENST00000576334 GGPS1O95749 300 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 CCND2P30279 289 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 HIC1Q14526 733 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 UBE2SQ16763 222 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 BRDTQ58F21 947 aaPredicted RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 DEFB128Q7Z7B8 93 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
LITAF-219ENST00000576334 MAP3K20Q9NYL2 800 aaKnown RBP13.73□□□□□ -0.21
LITAF-219ENST00000576334 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 KPNA6O60684 536 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
LITAF-219ENST00000576334 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
LITAF-219ENST00000576334 SGMS1Q86VZ5 419 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
LITAF-219ENST00000576334 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 SEC63Q9UGP8 760 aaKnown RBP13.72□□□□□ -0.21
LITAF-219ENST00000576334 STXBP5LQ9Y2K9 1186 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 REV3LO60673 3130 aa13.72□□□□□ -0.21
LITAF-219ENST00000576334 CNTNAP5Q8WYK1 1306 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
LITAF-219ENST00000576334 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
LITAF-219ENST00000576334 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms