RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 LTBP2Q14767 1821 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 RANBP2P49792 3224 aaKnown RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 RBM47A0AV96 593 aaKnown RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 DCDC2CA8MYV0 355 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 CTAGE5O15320 804 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 CLTBP09497 229 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 EIF2AK2P19525 551 aaKnown RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 RXRAP19793 462 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 PTGS1P23219 599 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 GNAQP50148 359 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 FXR1P51114 621 aaKnown RBP eCLIP10.5□□□□□ -0.73
NDE1-207ENST00000573203 NKX3-2P78367 333 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 PPP2R5BQ15173 497 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 TSGA10IPQ3SY00 556 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 TMEM63BQ5T3F8 832 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 SYNE3Q6ZMZ3 975 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 SCFD2Q8WU76 684 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 RRP36Q96EU6 259 aaKnown RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 LZTS2Q9BRK4 669 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 SPZ1Q9BXG8 430 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
NDE1-207ENST00000573203 MAP3K20Q9NYL2 800 aaKnown RBP10.5□□□□□ -0.73
NDE1-207ENST00000573203 GCOM1H8Y6P7 765 aaPredicted RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 ARVCFO00192 962 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 OPLAHO14841 1288 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
NDE1-207ENST00000573203 CABYRO75952 493 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 REC8O95072 547 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 POLR2MP0CAP2 368 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 HOXA13P31271 388 aaPredicted RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 RBM25P49756 843 aaKnown RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 HSD17B4P51659 736 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 TTLL4Q14679 1199 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 STXBP2Q15833 593 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 CXCL17Q6UXB2 119 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 SEPT14Q6ZU15 432 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 DHX32Q7L7V1 743 aaKnown RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 SH3RF1Q7Z6J0 888 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 SGMS1Q86VZ5 419 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 OR6J1Q8NGC5 347 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 PXMP2Q9NR77 195 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 TMEM39AQ9NV64 488 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 SEC63Q9UGP8 760 aaKnown RBP10.49□□□□□ -0.73
NDE1-207ENST00000573203 MROH7Q68CQ1 1323 aa10.49□□□□□ -0.73
NDE1-207ENST00000573203 TRIM43BA6NCK2 446 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 EPB41L2O43491 1005 aaKnown RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 NR3C2P08235 984 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 SMARCA1P28370 1054 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 CPT1AP50416 773 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 FGD1P98174 961 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 EXOSC10Q01780 885 aaKnown RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 GHRHRQ02643 423 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 FAAP100Q0VG06 881 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 BRDTQ58F21 947 aaPredicted RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 ANKRD33Q7Z3H0 272 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 MICU3Q86XE3 530 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 SRBD1Q8N5C6 995 aaKnown RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 FANCBQ8NB91 859 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 BADQ92934 168 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 TRIM43Q96BQ3 446 aaPredicted RBP10.48□□□□□ -0.73
NDE1-207ENST00000573203 TCEANC2Q96MN5 208 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 TOX2Q96NM4 488 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
NDE1-207ENST00000573203 MYH7BA7E2Y1 1941 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 KIAA0355O15063 1070 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 TLR3O15455 904 aaKnown RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 EIF3JO75822 258 aaKnown RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 MYL3P08590 195 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 RAG1P15918 1043 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 HSPA4P34932 840 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 CDK7P50613 346 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 ITGA7Q13683 1181 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 APOA5Q6Q788 366 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 TMTC3Q6ZXV5 915 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 CMTR1Q8N1G2 835 aaKnown RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 CCDC82Q8N4S0 544 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 COPS5Q92905 334 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 PDCD2LQ9BRP1 358 aa10.47□□□□□ -0.73
NDE1-207ENST00000573203 RBM28Q9NW13 759 aaKnown RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
NDE1-207ENST00000573203 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 ZBTB43O43298 467 aa10.46□□□□□ -0.73
NDE1-207ENST00000573203 ARIH2O95376 493 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms