RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 GRIN2DO15399 1336 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 PIK3CDO00329 1044 aa20.95■□□□□ 0.94
COMMD4-218ENST00000567377 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
COMMD4-218ENST00000567377 PTGS1P23219 599 aa20.95■□□□□ 0.94
COMMD4-218ENST00000567377 FAM109BQ6ICB4 259 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-218ENST00000567377 XRRA1Q6P2D8 792 aa20.95■□□□□ 0.94
COMMD4-218ENST00000567377 RASEFQ8IZ41 740 aa20.95■□□□□ 0.94
COMMD4-218ENST00000567377 COPS5Q92905 334 aa20.95■□□□□ 0.94
COMMD4-218ENST00000567377 ALDH8A1Q9H2A2 487 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-218ENST00000567377 KIAA1217Q5T5P2 1943 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 MYCLP12524 364 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-218ENST00000567377 ARHGAP1Q07960 439 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 DGKDQ16760 1214 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 LY6KQ17RY6 165 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 GNPTABQ3T906 1256 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 APOA5Q6Q788 366 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 TMTC3Q6ZXV5 915 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 FCHSD1Q86WN1 690 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 SMARCC2Q8TAQ2 1214 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 PIBF1Q8WXW3 757 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 LRRC2Q9BYS8 371 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 PPP4R2Q9NY27 417 aa20.94■□□□□ 0.94
COMMD4-218ENST00000567377 ZBTB43O43298 467 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 HSPA4P34932 840 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 PSMC6P62333 389 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 FGD1P98174 961 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 MICU3Q86XE3 530 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 DHX37Q8IY37 1157 aaKnown RBP20.93■□□□□ 0.94
COMMD4-218ENST00000567377 AFG1LQ8WV93 481 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 HIPK3Q9H422 1215 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 SCN10AQ9Y5Y9 1956 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 FRMPD4Q14CM0 1322 aa20.93■□□□□ 0.94
COMMD4-218ENST00000567377 B4GALT4O60513 344 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 MMP3P08254 477 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 PSMA5P28066 241 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 SMAD3P84022 425 aaKnown RBP20.92■□□□□ 0.94
COMMD4-218ENST00000567377 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-218ENST00000567377 NBPF20Q3BBV1 942 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 ADCK5Q3MIX3 580 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 C9orf50Q5SZB4 431 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 PPTC7Q8NI37 304 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 PSTPIP2Q9H939 334 aa20.92■□□□□ 0.94
COMMD4-218ENST00000567377 CCDC196A0A1B0GTZ2 297 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 PPFIA4O75335 1185 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 RXRAP19793 462 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 RTN1Q16799 776 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 PSRC1Q6PGN9 363 aaPredicted RBP20.91■□□□□ 0.94
COMMD4-218ENST00000567377 FBXL16Q8N461 479 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 RNPC3Q96LT9 517 aaKnown RBP20.91■□□□□ 0.94
COMMD4-218ENST00000567377 KATNAL1Q9BW62 490 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 TRPV6Q9H1D0 765 aa20.91■□□□□ 0.94
COMMD4-218ENST00000567377 LAMA2P24043 3122 aaKnown RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 hCG_1984214I3L0E3 225 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 MEIS2O14770 477 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 RGS20O76081 388 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 ICAM3P32942 547 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 CELF3Q5SZQ8 465 aaKnown RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 MYSM1Q5VVJ2 828 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 BLOC1S2Q6QNY1 142 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 RPUSD2Q8IZ73 545 aaKnown RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 DEFB123Q8N688 67 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 ZNF713Q8N859 430 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 INPP4AQ96PE3 977 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 NOC4LQ9BVI4 516 aaKnown RBP20.9■□□□□ 0.94
COMMD4-218ENST00000567377 PPP1R12CQ9BZL4 782 aa20.9■□□□□ 0.94
COMMD4-218ENST00000567377 HOXD8P13378 290 aaPredicted RBP20.89■□□□□ 0.93
COMMD4-218ENST00000567377 NEDD9Q14511 834 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 FAM47CQ5HY64 1035 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 PCNX4Q63HM2 1172 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 CMTR1Q8N1G2 835 aaKnown RBP20.89■□□□□ 0.93
COMMD4-218ENST00000567377 CCDC82Q8N4S0 544 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 GLT8D2Q9H1C3 349 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 MTIF3Q9H2K0 278 aaKnown RBP20.89■□□□□ 0.93
COMMD4-218ENST00000567377 IL23AQ9NPF7 189 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 SNX14Q9Y5W7 946 aa20.89■□□□□ 0.93
COMMD4-218ENST00000567377 KLF18A0A0U1RQI7 1052 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 CSF2RAP15509 400 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 CYP2C18P33260 490 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 EPHB4P54760 987 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 PPP1R18Q6NYC8 613 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 USP17L6PQ6QN14 398 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 IL31RAQ8NI17 732 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 JAKMIP1Q96N16 626 aaKnown RBP20.88■□□□□ 0.93
COMMD4-218ENST00000567377 EHMT1Q9H9B1 1298 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 MLXIPQ9HAP2 919 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
COMMD4-218ENST00000567377 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-218ENST00000567377 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-218ENST00000567377 GOLGA8AA7E2F4 631 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 GOLGA8BA8MQT2 603 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 SPATA31C2B4DYI2 1134 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 PITPNM1O00562 1244 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 FIBPO43427 364 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 GGPS1O95749 300 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 PFKMP08237 780 aa20.87■□□□□ 0.93
COMMD4-218ENST00000567377 MRPS9P82933 396 aaKnown RBP20.87■□□□□ 0.93
COMMD4-218ENST00000567377 BFSP2Q13515 415 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms