RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
FANCA-220ENST00000566409 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 MYCLP12524 364 aaPredicted RBP16.96■□□□□ 0.31
FANCA-220ENST00000566409 KIF5BP33176 963 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 FCHSD1Q86WN1 690 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 VWCEQ96DN2 955 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
FANCA-220ENST00000566409 TRIP12Q14669 1992 aaPredicted RBP16.95■□□□□ 0.3
FANCA-220ENST00000566409 GH1P01241 217 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 MMP3P08254 477 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 ACRP10323 421 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 SP2Q02086 613 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 TRAF1Q13077 416 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 RNF20Q5VTR2 975 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 FAM109BQ6ICB4 259 aaPredicted RBP16.95■□□□□ 0.3
FANCA-220ENST00000566409 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 KAT2BQ92831 832 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.3
FANCA-220ENST00000566409 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
FANCA-220ENST00000566409 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 WNT8AQ9H1J5 351 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 SCN5AQ14524 2016 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 DOCK5Q9H7D0 1870 aa16.95■□□□□ 0.3
FANCA-220ENST00000566409 EYSQ5T1H1 3165 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 hCG_1642624A0A1W2PR95 340 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 KPNA6O60684 536 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 CYP2C9P11712 490 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 BRDTQ58F21 947 aaPredicted RBP16.94■□□□□ 0.3
FANCA-220ENST00000566409 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 EMID1Q96A84 441 aaPredicted RBP16.94■□□□□ 0.3
FANCA-220ENST00000566409 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
FANCA-220ENST00000566409 BCAS3Q9H6U6 928 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 SLC12A7Q9Y666 1083 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 FRMPD4Q14CM0 1322 aa16.94■□□□□ 0.3
FANCA-220ENST00000566409 MEIS2O14770 477 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 CALM1P0DP23 149 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 CALM2P0DP24 149 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 CALM3P0DP25 149 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 GNAQP50148 359 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 CCL23P55773 120 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 MRPS9P82933 396 aaKnown RBP16.93■□□□□ 0.3
FANCA-220ENST00000566409 SMAD3P84022 425 aaKnown RBP16.93■□□□□ 0.3
FANCA-220ENST00000566409 PPIGQ13427 754 aaKnown RBP eCLIP16.93■□□□□ 0.38e-17■■■■□ 19.6
FANCA-220ENST00000566409 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 TMTC3Q6ZXV5 915 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 ZNF365Q70YC5 407 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
FANCA-220ENST00000566409 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 KCNB2Q92953 911 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 GUCD1Q96NT3 240 aa16.93■□□□□ 0.3
FANCA-220ENST00000566409 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 APOA5Q6Q788 366 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 TET1Q8NFU7 2136 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 IL23AQ9NPF7 189 aa16.92■□□□□ 0.3
FANCA-220ENST00000566409 MYO9BQ13459 2157 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 SORBS3O60504 671 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 HOXD8P13378 290 aaPredicted RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 CPA1P15085 419 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 CCND2P30279 289 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 SEMA3FQ13275 785 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 LAMC2Q13753 1193 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 PPTC7Q8NI37 304 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 SCLYQ96I15 445 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 TTYH1Q9H313 450 aaPredicted RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 CXXC1Q9P0U4 656 aaPredicted RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
FANCA-220ENST00000566409 UNC80Q8N2C7 3258 aa16.91■□□□□ 0.3
FANCA-220ENST00000566409 GBF1Q92538 1859 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 GGPS1O95749 300 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 TGFB3P10600 412 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 CASTP20810 708 aaKnown RBP16.9■□□□□ 0.3
FANCA-220ENST00000566409 HSPA4P34932 840 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 PTPN11Q06124 597 aaPredicted RBP16.9■□□□□ 0.3
FANCA-220ENST00000566409 FUT2Q10981 343 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 DGKDQ16760 1214 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 HSDL1Q3SXM5 330 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 DHX37Q8IY37 1157 aaKnown RBP16.9■□□□□ 0.3
FANCA-220ENST00000566409 INPP4AQ96PE3 977 aaPredicted RBP16.9■□□□□ 0.3
FANCA-220ENST00000566409 SEMA6BQ9H3T3 888 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
FANCA-220ENST00000566409 RTEL1Q9NZ71 1219 aa16.9■□□□□ 0.3
FANCA-220ENST00000566409 STXBP5LQ9Y2K9 1186 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms