RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 CSF2RAP15509 400 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 ARHGAP1Q07960 439 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 PGM5Q15124 567 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 MFSD5Q6N075 450 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 GPR153Q6NV75 609 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 SYNE3Q6ZMZ3 975 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 SEZ6LQ9BYH1 1024 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 ALDH8A1Q9H2A2 487 aaPredicted RBP14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 HIPK3Q9H422 1215 aa14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 TRMT13Q9NUP7 481 aaKnown RBP14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
SEMA4B-220ENST00000561321 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 MMP3P08254 477 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 ACRP10323 421 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 CCND2P30279 289 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 PPIGQ13427 754 aaKnown RBP eCLIP14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 FANCBQ8NB91 859 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 FAM161BQ96MY7 647 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 SCN10AQ9Y5Y9 1956 aa14.23□□□□□ -0.13
SEMA4B-220ENST00000561321 KPNA6O60684 536 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 RGS20O76081 388 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 CPA1P15085 419 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 CCL23P55773 120 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 KRT32Q14532 448 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 USP17L6PQ6QN14 398 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 TMTC3Q6ZXV5 915 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 VSIG10LQ86VR7 867 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 DHX37Q8IY37 1157 aaKnown RBP14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 SMARCC2Q8TAQ2 1214 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 CUL5Q93034 780 aa14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 NOC4LQ9BVI4 516 aaKnown RBP14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
SEMA4B-220ENST00000561321 CYP2C9P11712 490 aa14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 FGD1P98174 961 aa14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 EXOSC10Q01780 885 aaKnown RBP14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 APOA5Q6Q788 366 aa14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 GPKOWQ92917 476 aaPredicted RBP eCLIP14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
SEMA4B-220ENST00000561321 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 ZBTB43O43298 467 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 GGPS1O95749 300 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 SUPT20HL2P0C7V6 817 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 ZNF286BP0CG31 522 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 DGKDQ16760 1214 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 RTN1Q16799 776 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 TMEM240Q5SV17 173 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 ZNF697Q5TEC3 545 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 NFRKBQ6P4R8 1299 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 C16orf59Q7L2K0 433 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 HEATR3Q7Z4Q2 680 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 SCLYQ96I15 445 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 MTMR10Q9NXD2 777 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 NOD1Q9Y239 953 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 COL6A3P12111 3177 aa14.2□□□□□ -0.14
SEMA4B-220ENST00000561321 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 MEIS2O14770 477 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 UBA1P22314 1058 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 SMAD3P84022 425 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 SP2Q02086 613 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 CELF3Q5SZQ8 465 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 PSRC1Q6PGN9 363 aaPredicted RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 KCNV1Q6PIU1 500 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 ZNF365Q70YC5 407 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 PPTC7Q8NI37 304 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 KAT2BQ92831 832 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 EMID1Q96A84 441 aaPredicted RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 SPATA33Q96N06 139 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 ALG1Q9BT22 464 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 WNT8AQ9H1J5 351 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 PSTPIP2Q9H939 334 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 IL23AQ9NPF7 189 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 SNX14Q9Y5W7 946 aa14.19□□□□□ -0.14
SEMA4B-220ENST00000561321 FRMPD4Q14CM0 1322 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 HSPA4P34932 840 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 PSEN2P49810 448 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 PTGISQ16647 500 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 UBE2SQ16763 222 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 MYSM1Q5VVJ2 828 aa14.18□□□□□ -0.14
SEMA4B-220ENST00000561321 Q6ZUG5 572 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms