RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ZNF713Q8N859 430 aaPredicted RBP22.89■■□□□ 1.26
TSPAN3-210ENST00000561277 OR6J1Q8NGC5 347 aa22.89■■□□□ 1.26
TSPAN3-210ENST00000561277 Q9Y3F1 56 aa22.89■■□□□ 1.26
TSPAN3-210ENST00000561277 FRMPD4Q14CM0 1322 aa22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 PRPF3O43395 683 aaKnown RBP22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 ANKRD1Q15327 319 aa22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 RNF26Q9BY78 433 aaPredicted RBP22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 RBM27Q9P2N5 1060 aaKnown RBP22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 TPCN1Q9ULQ1 816 aa22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 ATP11BQ9Y2G3 1177 aa22.89■■□□□ 1.25
TSPAN3-210ENST00000561277 KIAA1217Q5T5P2 1943 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 NKRFO15226 690 aaKnown RBP eCLIP22.88■■□□□ 1.252e-6■□□□□ 8.4
TSPAN3-210ENST00000561277 ADCY7P51828 1080 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 RTP1P59025 263 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 PKN1Q16512 942 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 LY6KQ17RY6 165 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 ALDH8A1Q9H2A2 487 aaPredicted RBP22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 STARD7Q9NQZ5 370 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 MRVI1Q9Y6F6 885 aa22.88■■□□□ 1.25
TSPAN3-210ENST00000561277 SMCO2A6NFE2 343 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 SPDYE3A6NKU9 549 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 RGS20O76081 388 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 NKX3-2P78367 333 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 CCDC62Q6P9F0 684 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 GLT1D1Q96MS3 346 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 SLKQ9H2G2 1235 aaPredicted RBP22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 CEP290O15078 2479 aa22.87■■□□□ 1.25
TSPAN3-210ENST00000561277 SCRN1Q12765 414 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 TRIM60Q495X7 471 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 CPLX2Q6PUV4 134 aaKnown RBP22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 CXCL17Q6UXB2 119 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 TRIM22Q8IYM9 498 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 VTI1AQ96AJ9 217 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 C22orf23Q9BZE7 217 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 RIC8AQ9NPQ8 531 aa22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 ZMYND8Q9ULU4 1186 aaPredicted RBP22.86■■□□□ 1.25
TSPAN3-210ENST00000561277 ZEB2O60315 1214 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 SYN1P17600 705 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 MRPS9P82933 396 aaKnown RBP22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 PGBD1Q96JS3 809 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 PCDH10Q9P2E7 1040 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
TSPAN3-210ENST00000561277 CPT1AP50416 773 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 SSRP1Q08945 709 aaKnown RBP22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 RTEL1Q9NZ71 1219 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 SORBS3O60504 671 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 GH1P01241 217 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 SNX17Q15036 470 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 PCNX4Q63HM2 1172 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 CCDC12Q8WUD4 166 aaPredicted RBP22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 VPS54Q9P1Q0 977 aa22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 DDX41Q9UJV9 622 aaKnown RBP22.84■■□□□ 1.25
TSPAN3-210ENST00000561277 PFKFB2O60825 505 aa22.83■■□□□ 1.25
TSPAN3-210ENST00000561277 DTNBO60941 627 aa22.83■■□□□ 1.25
TSPAN3-210ENST00000561277 GNPTABQ3T906 1256 aa22.83■■□□□ 1.25
TSPAN3-210ENST00000561277 UPF2Q9HAU5 1272 aaKnown RBP22.83■■□□□ 1.25
TSPAN3-210ENST00000561277 TMEM260Q9NX78 707 aa22.83■■□□□ 1.25
TSPAN3-210ENST00000561277 ELP1O95163 1332 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 PQBP1O60828 265 aaKnown RBP22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 STAM2O75886 525 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 LARGE1O95461 756 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 MYL3P08590 195 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 ARHGAP1Q07960 439 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 BRDTQ58F21 947 aaPredicted RBP22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 NECAB1Q8N987 351 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 INPP4AQ96PE3 977 aaPredicted RBP22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 GLT8D2Q9H1C3 349 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 EHMT1Q9H9B1 1298 aa22.82■■□□□ 1.24
TSPAN3-210ENST00000561277 UBA1P22314 1058 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 ME3Q16798 604 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 C1orf53Q5VUE5 145 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 XRRA1Q6P2D8 792 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 KCNV1Q6PIU1 500 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 DHX37Q8IY37 1157 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 CCDC148Q8NFR7 591 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 AFG1LQ8WV93 481 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 KIF2CQ99661 725 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 ANO3Q9BYT9 981 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 ZMYND12Q9H0C1 365 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 C6orf50Q9HD87 102 aa22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 PRDM5Q9NQX1 630 aaPredicted RBP22.81■■□□□ 1.24
TSPAN3-210ENST00000561277 A0A0U1RQG5 324 aaPredicted RBP22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 ESYT2A0FGR8 921 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 CABYRO75952 493 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 CDKL5O76039 1030 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 DEXIO95424 95 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 RBM25P49756 843 aaKnown RBP22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 CLK2P49760 499 aaKnown RBP22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 SP2Q02086 613 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 TLE2Q04725 743 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 JAKMIP3Q5VZ66 844 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 POLR3EQ9NVU0 708 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 A6NJR5 290 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 ADAMTS3O15072 1205 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 GGPS1O95749 300 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 PSMC6P62333 389 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 PURAQ00577 322 aaKnown RBP22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 AP3B2Q13367 1082 aa22.8■■□□□ 1.24
TSPAN3-210ENST00000561277 TEX2Q8IWB9 1127 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms