RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 EHMT1Q9H9B1 1298 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
SNX1-212ENST00000560861 CYP39A1Q9NYL5 469 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 RABGAP1Q9Y3P9 1069 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
SNX1-212ENST00000560861 PP2D1A8MPX8 630 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 MEIS1O00470 390 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 MSH4O15457 936 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
SNX1-212ENST00000560861 PDIA5Q14554 519 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 CAMK4Q16566 473 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 NIPA1Q7RTP0 329 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 CYP2W1Q8TAV3 490 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 LRRC15Q8TF66 581 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 PTPN18Q99952 460 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.37
SNX1-212ENST00000560861 UBIAD1Q9Y5Z9 338 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 KIAA1217Q5T5P2 1943 aa12.77□□□□□ -0.37
SNX1-212ENST00000560861 PDHXO00330 501 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
SNX1-212ENST00000560861 SLC10A3P09131 477 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 BCRP11274 1271 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 TXKP42681 527 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 UBXN2AP68543 259 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 MRPS9P82933 396 aaKnown RBP12.76□□□□□ -0.37
SNX1-212ENST00000560861 PGM5Q15124 567 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 Q3C1V9 767 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 CEP55Q53EZ4 464 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 PRR16Q569H4 304 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 NAALADL2Q58DX5 795 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 FAM43AQ8N2R8 423 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
SNX1-212ENST00000560861 SLC5A5Q92911 643 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 GJA10Q969M2 543 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
SNX1-212ENST00000560861 PDCD2LQ9BRP1 358 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 PXMP2Q9NR77 195 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 TLL2Q9Y6L7 1015 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 ASTN1O14525 1302 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
SNX1-212ENST00000560861 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
SNX1-212ENST00000560861 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 SLC25A27O95847 323 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 CYP2C8P10632 490 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 ITGB5P18084 799 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 CDC25AP30304 524 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 COPB2P35606 906 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 TECP42680 631 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 PLS1Q14651 629 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 XRRA1Q6P2D8 792 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 SMC1BQ8NDV3 1235 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 SHCBP1Q8NEM2 672 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 PNMA5Q96PV4 448 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 MXRA8Q9BRK3 442 aa12.75□□□□□ -0.37
SNX1-212ENST00000560861 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
SNX1-212ENST00000560861 PFASO15067 1338 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 POTEMA6NI47 508 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 FOXN1O15353 648 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 SLC26A4O43511 780 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 PSMD10O75832 226 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 ARP10275 920 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 ERCC3P19447 782 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
SNX1-212ENST00000560861 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
SNX1-212ENST00000560861 GRB10Q13322 594 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 KARSQ15046 597 aaKnown RBP12.74□□□□□ -0.37
SNX1-212ENST00000560861 TMEM266Q2M3C6 531 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 HYIQ5T013 277 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 CABP7Q86V35 215 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 PDILTQ8N807 584 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 FAM133AQ8N9E0 248 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 DHX58Q96C10 678 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 FGD4Q96M96 766 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 RMDN3Q96TC7 470 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 MTRQ99707 1265 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 NUDT12Q9BQG2 462 aa12.74□□□□□ -0.37
SNX1-212ENST00000560861 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms