RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ADAMTS3O15072 1205 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
USP8-212ENST00000560730 ASGR1P07306 291 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 TXNP10599 105 aaKnown RBP13.9□□□□□ -0.18
USP8-212ENST00000560730 SCG2P13521 617 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 NEK4P51957 841 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 NAPAP54920 295 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
USP8-212ENST00000560730 FSCN1Q16658 493 aaKnown RBP13.9□□□□□ -0.18
USP8-212ENST00000560730 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
USP8-212ENST00000560730 LY6KQ17RY6 165 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 BARHL2Q9NY43 387 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 Q9Y3F1 56 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
USP8-212ENST00000560730 CCND2P30279 289 aa13.9□□□□□ -0.19
USP8-212ENST00000560730 RTP1P59025 263 aa13.9□□□□□ -0.19
USP8-212ENST00000560730 TTLL4Q14679 1199 aa13.9□□□□□ -0.19
USP8-212ENST00000560730 PRPF38BQ5VTL8 546 aaKnown RBP13.9□□□□□ -0.19
USP8-212ENST00000560730 KIF2CQ99661 725 aa13.9□□□□□ -0.19
USP8-212ENST00000560730 RIC8AQ9NPQ8 531 aa13.9□□□□□ -0.19
USP8-212ENST00000560730 SMCO2A6NFE2 343 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 LARGE1O95461 756 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 ADCY7P51828 1080 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 SCRN1Q12765 414 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 SNX17Q15036 470 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
USP8-212ENST00000560730 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
USP8-212ENST00000560730 RTEL1Q9NZ71 1219 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 DDX41Q9UJV9 622 aaKnown RBP13.89□□□□□ -0.19
USP8-212ENST00000560730 ZMYND8Q9ULU4 1186 aaPredicted RBP13.89□□□□□ -0.19
USP8-212ENST00000560730 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 NR2E3Q9Y5X4 410 aa13.89□□□□□ -0.19
USP8-212ENST00000560730 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP8-212ENST00000560730 PFKFB2O60825 505 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 SYN1P17600 705 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 SP2Q02086 613 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 ARHGAP1Q07960 439 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
USP8-212ENST00000560730 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 SLKQ9H2G2 1235 aaPredicted RBP13.88□□□□□ -0.19
USP8-212ENST00000560730 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
USP8-212ENST00000560730 CPLX1O14810 134 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 SORBS3O60504 671 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 AKAP17AQ02040 695 aaKnown RBP13.87□□□□□ -0.19
USP8-212ENST00000560730 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
USP8-212ENST00000560730 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 ME3Q16798 604 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 PCNX4Q63HM2 1172 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 AIFM3Q96NN9 605 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
USP8-212ENST00000560730 SCN10AQ9Y5Y9 1956 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 GRIN2DO15399 1336 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 ELP1O95163 1332 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 A6NJR5 290 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 CTDNEP1O95476 244 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 GH1P01241 217 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 MYL3P08590 195 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
USP8-212ENST00000560730 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
USP8-212ENST00000560730 TLE2Q04725 743 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 C1orf53Q5VUE5 145 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 AFG1LQ8WV93 481 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 INPP4AQ96PE3 977 aaPredicted RBP13.86□□□□□ -0.19
USP8-212ENST00000560730 ZMYND12Q9H0C1 365 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 VPS54Q9P1Q0 977 aa13.86□□□□□ -0.19
USP8-212ENST00000560730 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
USP8-212ENST00000560730 ESYT2A0FGR8 921 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 ZEB2O60315 1214 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 CPT1AP50416 773 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 CDK7P50613 346 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 PSMC6P62333 389 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
USP8-212ENST00000560730 JAKMIP3Q5VZ66 844 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 SH3RF1Q7Z6J0 888 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 TRIM22Q8IYM9 498 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 PPP1R13LQ8WUF5 828 aa13.85□□□□□ -0.19
USP8-212ENST00000560730 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
USP8-212ENST00000560730 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
USP8-212ENST00000560730 PQBP1O60828 265 aaKnown RBP13.84□□□□□ -0.19
USP8-212ENST00000560730 STAM2O75886 525 aa13.84□□□□□ -0.19
USP8-212ENST00000560730 ITGB5P18084 799 aa13.84□□□□□ -0.19
USP8-212ENST00000560730 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms