RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 SLC12A7Q9Y666 1083 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 MMP3P08254 477 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 CYP2C18P33260 490 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 PSRC1Q6PGN9 363 aaPredicted RBP20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 AFG1LQ8WV93 481 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 NEK1Q96PY6 1258 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 NOC4LQ9BVI4 516 aaKnown RBP20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 MRVI1Q9Y6F6 885 aa20.8■□□□□ 0.92
TNFAIP2-206ENST00000560428 FRMPD4Q14CM0 1322 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 RGS20O76081 388 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 MYCLP12524 364 aaPredicted RBP20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 CCND2P30279 289 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 KRT32Q14532 448 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 SRBD1Q8N5C6 995 aaKnown RBP20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 PIBF1Q8WXW3 757 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 IL23AQ9NPF7 189 aa20.79■□□□□ 0.92
TNFAIP2-206ENST00000560428 PLEKHA8P1O95397 391 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 TGFB3P10600 412 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 LAMC2Q13753 1193 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 TMEM240Q5SV17 173 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 FCHSD1Q86WN1 690 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 IL31RAQ8NI17 732 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 TRMT13Q9NUP7 481 aaKnown RBP20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 STXBP5LQ9Y2K9 1186 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
TNFAIP2-206ENST00000560428 PIK3CDO00329 1044 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 STAM2O75886 525 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 RXRAP19793 462 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 CASTP20810 708 aaKnown RBP20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 EXOSC10Q01780 885 aaKnown RBP20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 DGKDQ16760 1214 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 FAM47CQ5HY64 1035 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 RASIP1Q5U651 963 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 DHX32Q7L7V1 743 aaKnown RBP20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 FANCBQ8NB91 859 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 PPTC7Q8NI37 304 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 LRRC2Q9BYS8 371 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 WNT8AQ9H1J5 351 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 COL6A3P12111 3177 aa20.77■□□□□ 0.92
TNFAIP2-206ENST00000560428 TMEM265A0A087WTH1 108 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 TMTC3Q6ZXV5 915 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 SESTD1Q86VW0 696 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 RASEFQ8IZ41 740 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 CUL5Q93034 780 aa20.76■□□□□ 0.91
TNFAIP2-206ENST00000560428 HMGB1P09429 215 aaKnown RBP20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 HOXD8P13378 290 aaPredicted RBP20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 CCL23P55773 120 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 CELF3Q5SZQ8 465 aaKnown RBP20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 MYSM1Q5VVJ2 828 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 APOA5Q6Q788 366 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 ZNF365Q70YC5 407 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 MICU3Q86XE3 530 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 SMARCC2Q8TAQ2 1214 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 KAT2BQ92831 832 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 KATNAL1Q9BW62 490 aa20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 RBM28Q9NW13 759 aaKnown RBP20.75■□□□□ 0.91
TNFAIP2-206ENST00000560428 MYH7BA7E2Y1 1941 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 PITPNM1O00562 1244 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 MEIS2O14770 477 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 ACRP10323 421 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 CYP2C9P11712 490 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 UBA1P22314 1058 aaKnown RBP20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 XRRA1Q6P2D8 792 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 RPUSD2Q8IZ73 545 aaKnown RBP20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 HERVK_113Q902F9 699 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 KCNB2Q92953 911 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 GUCD1Q96NT3 240 aa20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 INPP4AQ96PE3 977 aaPredicted RBP20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 MTIF3Q9H2K0 278 aaKnown RBP20.74■□□□□ 0.91
TNFAIP2-206ENST00000560428 TANC1Q9C0D5 1861 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 GGPS1O95749 300 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 F2P00734 622 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 FGBP02675 491 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 NEFLP07196 543 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 PFKMP08237 780 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 ICAM3P32942 547 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 RCAN1P53805 252 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 MRPS9P82933 396 aaKnown RBP20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
TNFAIP2-206ENST00000560428 PPFIA4O75335 1185 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 RFC2P35250 354 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 SP2Q02086 613 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 PCNX4Q63HM2 1172 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 USP17L6PQ6QN14 398 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 SPATA33Q96N06 139 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 PSTPIP2Q9H939 334 aa20.72■□□□□ 0.91
TNFAIP2-206ENST00000560428 NOD1Q9Y239 953 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms