RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 GJA9P57773 515 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 KCNA10Q16322 511 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 CCDC12Q8WUD4 166 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 COPS5Q92905 334 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 MRVI1Q9Y6F6 885 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
RABGGTA-206ENST00000558649 SORBS3O60504 671 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 DEXIO95424 95 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 LY6KQ17RY6 165 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 VSIG10LQ86VR7 867 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 PHF24Q9UPV7 400 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
RABGGTA-206ENST00000558649 MKI67P46013 3256 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 A0A1W2PQ45 241 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 A0A1W2PQY0 241 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 EVI5O60447 810 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 ASGR1P07306 291 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 ACLYP53396 1101 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 LRRC26Q2I0M4 334 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 C7orf61Q8IZ16 206 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 GTF3C6Q969F1 213 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 AIFM3Q96NN9 605 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 EHMT1Q9H9B1 1298 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 C6orf50Q9HD87 102 aa18.17■□□□□ 0.5
RABGGTA-206ENST00000558649 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 CTAGE5O15320 804 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 RGS20O76081 388 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 CST5P28325 142 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 MRPS9P82933 396 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 RABEP1Q15276 862 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 JAKMIP3Q5VZ66 844 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 VTI1AQ96AJ9 217 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 ANO3Q9BYT9 981 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 GLT8D2Q9H1C3 349 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 Q9Y3F1 56 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 DOCK5Q9H7D0 1870 aa18.16■□□□□ 0.5
RABGGTA-206ENST00000558649 MYH7BA7E2Y1 1941 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 ESYT2A0FGR8 921 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 MOXD2PA6NHM9 499 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 NLRP5P59047 1200 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 CCSAPQ6IQ19 270 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 CCDC62Q6P9F0 684 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 REXO1Q8N1G1 1221 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 STARD7Q9NQZ5 370 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 ATP11BQ9Y2G3 1177 aa18.15■□□□□ 0.5
RABGGTA-206ENST00000558649 ZEB2O60315 1214 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 GH1P01241 217 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 MYL3P08590 195 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 GNA11P29992 359 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 CPT1AP50416 773 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 RTP1P59025 263 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 SLC39A5Q6ZMH5 540 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 CCDC83Q8IWF9 413 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 RASGRP4Q8TDF6 673 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 SH3GLB2Q9NR46 395 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 ORC3Q9UBD5 711 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 DDX41Q9UJV9 622 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
RABGGTA-206ENST00000558649 ST18O60284 1047 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 STAM2O75886 525 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 FOSP01100 380 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 UBA1P22314 1058 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 FOSBP53539 338 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 ARHGAP1Q07960 439 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 AP3B2Q13367 1082 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 BICD2Q8TD16 824 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 GLT1D1Q96MS3 346 aa18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 INPP4AQ96PE3 977 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-206ENST00000558649 JAK2O60674 1132 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 GGPS1O95749 300 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 NKX3-2P78367 333 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 SP2Q02086 613 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 ST3GAL1Q11201 340 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 BRDTQ58F21 947 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 XRRA1Q6P2D8 792 aa18.12■□□□□ 0.49
RABGGTA-206ENST00000558649 KCNV1Q6PIU1 500 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms