RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MASP1P48740 699 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 GUCY1A3Q02108 690 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 C21orf62-AS1Q17RA5 79 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
SRP54-209ENST00000555746 MTDHQ86UE4 582 aaKnown RBP4.83□□□□□ -1.64
SRP54-209ENST00000555746 RIOX2Q8IUF8 465 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 PLEKHO2Q8TD55 490 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 MYLIPQ8WY64 445 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 PDLIM7Q9NR12 457 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 GULP1Q9UBP9 304 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 PCDHA9Q9Y5H5 950 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 PCDHA8Q9Y5H6 950 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 DIP2BQ9P265 1576 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 B4E1Z4 1266 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 IRS4O14654 1257 aaPredicted RBP4.82□□□□□ -1.64
SRP54-209ENST00000555746 RASGRP1O95267 797 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 NPTXRO95502 500 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 SOD2P04179 222 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 VIL1P09327 827 aaKnown RBP4.82□□□□□ -1.64
SRP54-209ENST00000555746 PRKCAP17252 672 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 KCNA6P17658 529 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 GRK2P25098 689 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 GRK3P35626 688 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 IGFALSP35858 605 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 PAK1Q13153 545 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 RNF187Q5TA31 235 aaPredicted RBP4.82□□□□□ -1.64
SRP54-209ENST00000555746 LRRTM3Q86VH5 581 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 DHX37Q8IY37 1157 aaKnown RBP4.82□□□□□ -1.64
SRP54-209ENST00000555746 LZTR1Q8N653 840 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 NUP43Q8NFH3 380 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 ABHD4Q8TB40 342 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 TMEM169Q96HH4 297 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 ORAI3Q9BRQ5 295 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 ALG1Q9BT22 464 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 C19orf44Q9H6X5 657 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 MARCH2Q9P0N8 246 aa4.82□□□□□ -1.64
SRP54-209ENST00000555746 PCF11O94913 1555 aaKnown RBP4.82□□□□□ -1.64
SRP54-209ENST00000555746 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 FAM47E-STBD1D6RA91 191 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 SRGAP3O43295 1099 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 APPP05067 770 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 CKMP06732 381 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 TRHRP34981 398 aaPredicted RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 KIR3DS1Q14943 382 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 MROH9Q5TGP6 573 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 CEP68Q76N32 757 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 KRT26Q7Z3Y9 468 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 TEX2Q8IWB9 1127 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 DDX1Q92499 740 aaKnown RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 TRMT2BQ96GJ1 504 aaKnown RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 IPPKQ9H8X2 491 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 SPC25Q9HBM1 224 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 TNFRSF12AQ9NP84 129 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 CLDND1Q9NY35 253 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 PPARGC1AQ9UBK2 798 aaKnown RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 FBLN5Q9UBX5 448 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 GPR160Q9UJ42 338 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 YBX2Q9Y2T7 364 aaKnown RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 RWDD3Q9Y3V2 267 aa4.81□□□□□ -1.64
SRP54-209ENST00000555746 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
SRP54-209ENST00000555746 C22orf46C9J442 243 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 OPA1O60313 960 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 DNAJC6O75061 913 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 FUCA1P04066 466 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 GLI4P10075 376 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 MYCLP1P12525 358 aaPredicted RBP4.8□□□□□ -1.64
SRP54-209ENST00000555746 FPR2P25090 351 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 ARL4AP40617 200 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 STAT3P40763 770 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 ERVFRD-1P60508 538 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 CYP4F8P98187 520 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 ZNF460Q14592 562 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 HABP4Q5JVS0 413 aaKnown RBP4.8□□□□□ -1.64
SRP54-209ENST00000555746 FYB2Q5VWT5 728 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 ZCCHC8Q6NZY4 707 aaKnown RBP4.8□□□□□ -1.64
SRP54-209ENST00000555746 ABHD17CQ6PCB6 329 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 C16orf59Q7L2K0 433 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 RNF180Q86T96 592 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 PPM1KQ8N3J5 372 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 NETO2Q8NC67 525 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 KIRREL1Q96J84 757 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 CHAMP1Q96JM3 812 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 TARS2Q9BW92 718 aaKnown RBP4.8□□□□□ -1.64
SRP54-209ENST00000555746 CELF4Q9BZC1 486 aaKnown RBP4.8□□□□□ -1.64
SRP54-209ENST00000555746 BRINP2Q9C0B6 783 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 RNF32Q9H0A6 362 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 EPB41L1Q9H4G0 881 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 IFT57Q9NWB7 429 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 SNAPC4Q5SXM2 1469 aa4.8□□□□□ -1.64
SRP54-209ENST00000555746 MED1Q15648 1581 aaPredicted RBP4.79□□□□□ -1.64
SRP54-209ENST00000555746 PEG3Q9GZU2 1588 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms