RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 THAP5Q7Z6K1 395 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 DNAJC10Q8IXB1 793 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 SLFN12Q8IYM2 578 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 DTWD2Q8NBA8 298 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 KREMEN1Q96MU8 473 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 BACH2Q9BYV9 841 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 GOLGA2P5Q9HBQ8 144 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 NUDCQ9Y266 331 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 SOS1Q07889 1333 aaPredicted RBP5.5□□□□□ -1.53
VTI1B-203ENST00000554636 SCN7AQ01118 1682 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 KDM3BQ7LBC6 1761 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 BRCA1P38398 1863 aaKnown RBP5.5□□□□□ -1.53
VTI1B-203ENST00000554636 CYP19A1P11511 503 aaPredicted RBP5.5□□□□□ -1.53
VTI1B-203ENST00000554636 GYS1P13807 737 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF76P36508 570 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 HK2P52789 917 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 CLCQ05315 142 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 KCNMB1Q16558 191 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 RALGPS1Q5JS13 557 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF648Q5T619 568 aaPredicted RBP5.5□□□□□ -1.53
VTI1B-203ENST00000554636 LDLRAD1Q5T700 205 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 OVOS1Q6IE37 1185 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ZSWIM9Q86XI8 627 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 PIWIL2Q8TC59 973 aaKnown RBP5.5□□□□□ -1.53
VTI1B-203ENST00000554636 RNF141Q8WVD5 230 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ALPK1Q96QP1 1244 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 GPATCH2Q9NW75 528 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 DUSP13Q9UII6 198 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 KCNH3Q9ULD8 1083 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 ZBTB1Q9Y2K1 713 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 CD2APQ9Y5K6 639 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 HEG1Q9ULI3 1381 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 PXDNLA1KZ92 1463 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 LAMB4A4D0S4 1761 aa5.5□□□□□ -1.53
VTI1B-203ENST00000554636 USP42Q9H9J4 1324 aaKnown RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 NRXN2Q9P2S2 1712 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 DNAJC25-GNG10A0A024R161 153 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 FAM86C2PA6NEL3 165 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 KCNQ3O43525 872 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 GREM1O60565 184 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 ESR1P03372 595 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 MMP10P09238 476 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 YBX3P16989 372 aaKnown RBP eCLIP5.49□□□□□ -1.535e-11■□□□□ 11.1
VTI1B-203ENST00000554636 YY1P25490 414 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 DDX10Q13206 875 aaKnown RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 RALBP1Q15311 655 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF790Q6PG37 636 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 KIAA0825Q8IV33 1275 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF496Q96IT1 587 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 PLEKHF1Q96S99 279 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 SPON2Q9BUD6 331 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 DUSP15Q9H1R2 295 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 TRIT1Q9H3H1 467 aaKnown RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 ANTXR1Q9H6X2 564 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 SRP68Q9UHB9 627 aaKnown RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 COL15A1P39059 1388 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 BCORQ6W2J9 1755 aa5.49□□□□□ -1.53
VTI1B-203ENST00000554636 N4BP2Q86UW6 1770 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-203ENST00000554636 AFDNP55196 1824 aaKnown RBP5.48□□□□□ -1.53
VTI1B-203ENST00000554636 SHISA3A0PJX4 238 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 HTATSF1O43719 755 aaKnown RBP5.48□□□□□ -1.53
VTI1B-203ENST00000554636 RFC4P35249 363 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 EGR3Q06889 387 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 DDR1Q08345 913 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 TEFQ10587 303 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 DCTN1Q14203 1278 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 MCM10Q7L590 875 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 TMPRSS7Q7RTY8 843 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 TTC6Q86TZ1 520 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 USP48Q86UV5 1035 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 TTC5Q8N0Z6 440 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 NLGN1Q8N2Q7 840 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 NKD1Q969G9 470 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 LIN37Q96GY3 246 aaPredicted RBP5.48□□□□□ -1.53
VTI1B-203ENST00000554636 KIRREL1Q96J84 757 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 ZNF512BQ96KM6 892 aaPredicted RBP5.48□□□□□ -1.53
VTI1B-203ENST00000554636 GMIPQ9P107 970 aa5.48□□□□□ -1.53
VTI1B-203ENST00000554636 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
VTI1B-203ENST00000554636 BTBD11A6QL63 1104 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
VTI1B-203ENST00000554636 UBOX5O94941 541 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 AFMP43652 599 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 EIF5P55010 431 aaKnown RBP5.47□□□□□ -1.53
VTI1B-203ENST00000554636 ERVFC1P60507 584 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 FANCCQ00597 558 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 NFE2L2Q16236 605 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 GPR162Q16538 588 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 MLANAQ16655 118 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 CLEC16AQ2KHT3 1053 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms