RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 SMARCC2Q8TAQ2 1214 aa23.83■■□□□ 1.41
HIF1A-206ENST00000553999 MAP3K14Q99558 947 aa23.83■■□□□ 1.41
HIF1A-206ENST00000553999 LZTS2Q9BRK4 669 aa23.83■■□□□ 1.41
HIF1A-206ENST00000553999 MTG1Q9BT17 334 aaPredicted RBP23.83■■□□□ 1.41
HIF1A-206ENST00000553999 GOLGA8AA7E2F4 631 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 GOLGA8BA8MQT2 603 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 EIF3JO75822 258 aaKnown RBP23.82■■□□□ 1.4
HIF1A-206ENST00000553999 ACRP10323 421 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 ARHGAP1Q07960 439 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 TRAF1Q13077 416 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 KRT32Q14532 448 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 LRIT3Q3SXY7 679 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 RTEL1Q9NZ71 1219 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 SNX14Q9Y5W7 946 aa23.82■■□□□ 1.4
HIF1A-206ENST00000553999 RBAK-RBAKDNI3L0D1 243 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 RGS20O76081 388 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 TIMP1P01033 207 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 MMP3P08254 477 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 CYP2C9P11712 490 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 CSF2RAP15509 400 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 CCND2P30279 289 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 CCL23P55773 120 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 APOBRQ0VD83 1088 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 UBE2SQ16763 222 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 RTN1Q16799 776 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 NBPF20Q3BBV1 942 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 SGMS1Q86VZ5 419 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 CUL5Q93034 780 aa23.81■■□□□ 1.4
HIF1A-206ENST00000553999 RNPC3Q96LT9 517 aaKnown RBP23.81■■□□□ 1.4
HIF1A-206ENST00000553999 DDX41Q9UJV9 622 aaKnown RBP23.81■■□□□ 1.4
HIF1A-206ENST00000553999 ZBTB43O43298 467 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 CD4P01730 458 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 ZNF286BP0CG31 522 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 HSPA4P34932 840 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 GHRHRQ02643 423 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 Q6ZUG5 572 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 SLC43A3Q8NBI5 491 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 FAM161BQ96MY7 647 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 MAF1Q9H063 256 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 ALDH8A1Q9H2A2 487 aaPredicted RBP23.8■■□□□ 1.4
HIF1A-206ENST00000553999 HIPK3Q9H422 1215 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 CNTNAP5Q8WYK1 1306 aa23.8■■□□□ 1.4
HIF1A-206ENST00000553999 A6NJR5 290 aa23.79■■□□□ 1.4
HIF1A-206ENST00000553999 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
HIF1A-206ENST00000553999 KIAA1217Q5T5P2 1943 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 REC8O95072 547 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 GGPS1O95749 300 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 CENPBP07199 599 aaPredicted RBP23.78■■□□□ 1.4
HIF1A-206ENST00000553999 TSGA10IPQ3SY00 556 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 MFSD5Q6N075 450 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 BLOC1S2Q6QNY1 142 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 VSIG10LQ86VR7 867 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
HIF1A-206ENST00000553999 DEFB123Q8N688 67 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 BRF1Q92994 677 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 ALG1Q9BT22 464 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 BCAS3Q9H6U6 928 aa23.78■■□□□ 1.4
HIF1A-206ENST00000553999 MAP3K20Q9NYL2 800 aaKnown RBP23.78■■□□□ 1.4
HIF1A-206ENST00000553999 CASTP20810 708 aaKnown RBP23.77■■□□□ 1.4
HIF1A-206ENST00000553999 UBA1P22314 1058 aaKnown RBP23.77■■□□□ 1.4
HIF1A-206ENST00000553999 CDC27P30260 824 aa23.77■■□□□ 1.4
HIF1A-206ENST00000553999 SP2Q02086 613 aa23.77■■□□□ 1.4
HIF1A-206ENST00000553999 SCLYQ96I15 445 aa23.77■■□□□ 1.4
HIF1A-206ENST00000553999 MEIS2O14770 477 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 SMARCA1P28370 1054 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 MRPS9P82933 396 aaKnown RBP23.76■■□□□ 1.39
HIF1A-206ENST00000553999 SP4Q02446 784 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 WWC2Q6AWC2 1192 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 TMEM199Q8N511 208 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 PGBD1Q96JS3 809 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 SPATA33Q96N06 139 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.76■■□□□ 1.39
HIF1A-206ENST00000553999 NOC4LQ9BVI4 516 aaKnown RBP23.76■■□□□ 1.39
HIF1A-206ENST00000553999 PSTPIP2Q9H939 334 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 RBM28Q9NW13 759 aaKnown RBP23.76■■□□□ 1.39
HIF1A-206ENST00000553999 PKD2L1Q9P0L9 805 aa23.76■■□□□ 1.39
HIF1A-206ENST00000553999 NAPAP54920 295 aa23.75■■□□□ 1.39
HIF1A-206ENST00000553999 WNT8AQ9H1J5 351 aa23.75■■□□□ 1.39
HIF1A-206ENST00000553999 NOD1Q9Y239 953 aa23.75■■□□□ 1.39
HIF1A-206ENST00000553999 V9GY48 417 aaPredicted RBP23.75■■□□□ 1.39
HIF1A-206ENST00000553999 HMGB1P09429 215 aaKnown RBP23.74■■□□□ 1.39
HIF1A-206ENST00000553999 RPS6KB1P23443 525 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 METAP2P50579 478 aaKnown RBP eCLIP23.74■■□□□ 1.39
HIF1A-206ENST00000553999 PPIGQ13427 754 aaKnown RBP eCLIP23.74■■□□□ 1.39
HIF1A-206ENST00000553999 TYW1BQ6NUM6 668 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 C16orf59Q7L2K0 433 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 SAMD3Q8N6K7 520 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 KAT2BQ92831 832 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 KCNB2Q92953 911 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 LARP6Q9BRS8 491 aaKnown RBP23.74■■□□□ 1.39
HIF1A-206ENST00000553999 MLXIPQ9HAP2 919 aa23.74■■□□□ 1.39
HIF1A-206ENST00000553999 KPNA6O60684 536 aa23.73■■□□□ 1.39
HIF1A-206ENST00000553999 ADD1P35611 737 aaKnown RBP23.73■■□□□ 1.39
HIF1A-206ENST00000553999 LAMC2Q13753 1193 aa23.73■■□□□ 1.39
HIF1A-206ENST00000553999 DGKDQ16760 1214 aa23.73■■□□□ 1.39
HIF1A-206ENST00000553999 HSDL1Q3SXM5 330 aa23.73■■□□□ 1.39
HIF1A-206ENST00000553999 CELF3Q5SZQ8 465 aaKnown RBP23.73■■□□□ 1.39
HIF1A-206ENST00000553999 ZNF365Q70YC5 407 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms