RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 MICU3Q86XE3 530 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 EMID1Q96A84 441 aaPredicted RBP15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 DDX41Q9UJV9 622 aaKnown RBP15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 ZBTB43O43298 467 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 ARIH2O95376 493 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 MYL3P08590 195 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 MYCLP12524 364 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 CASTP20810 708 aaKnown RBP15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 PTGS1P23219 599 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 PSMA5P28066 241 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 FGD1P98174 961 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 LAMC2Q13753 1193 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 COL9A3Q14050 684 aaPredicted RBP15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 LY6KQ17RY6 165 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 MFSD5Q6N075 450 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 FCHSD1Q86WN1 690 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 SMARCC2Q8TAQ2 1214 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 COPS5Q92905 334 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
HNRNPC-205ENST00000553300 LAMA2P24043 3122 aaKnown RBP15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 SOX1O00570 391 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 RXRAP19793 462 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 PSMC6P62333 389 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 PTPN11Q06124 597 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 XRRA1Q6P2D8 792 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 NFRKBQ6P4R8 1299 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 FBXL16Q8N461 479 aa15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 ALDH8A1Q9H2A2 487 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-205ENST00000553300 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.021e-9■□□□□ 9.6
HNRNPC-205ENST00000553300 SHHQ15465 462 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 DGKDQ16760 1214 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 RTN1Q16799 776 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 BLOC1S2Q6QNY1 142 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 DHX37Q8IY37 1157 aaKnown RBP15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 JAKMIP1Q96N16 626 aaKnown RBP15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 PSTPIP2Q9H939 334 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
HNRNPC-205ENST00000553300 hCG_1984214I3L0E3 225 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 MEIS2O14770 477 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 RGS20O76081 388 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 MMP3P08254 477 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 NBPF20Q3BBV1 942 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 ZNF713Q8N859 430 aaPredicted RBP15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 PPTC7Q8NI37 304 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 TCEANC2Q96MN5 208 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 HIPK3Q9H422 1215 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 BRPF3Q9ULD4 1205 aa15.14■□□□□ 0.01
HNRNPC-205ENST00000553300 KLF18A0A0U1RQI7 1052 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 B4GALT4O60513 344 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 PPFIA4O75335 1185 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 ICAM3P32942 547 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 CELF3Q5SZQ8 465 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 MYSM1Q5VVJ2 828 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 USP17L6PQ6QN14 398 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 RAB11FIP4Q86YS3 637 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 MYH7BA7E2Y1 1941 aa15.13■□□□□ 0.01
HNRNPC-205ENST00000553300 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 NEDD9Q14511 834 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 FAM47CQ5HY64 1035 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 PPP1R18Q6NYC8 613 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 PSRC1Q6PGN9 363 aaPredicted RBP15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 Q6ZUG5 572 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 HEATR3Q7Z4Q2 680 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 NOC4LQ9BVI4 516 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 PPP1R12CQ9BZL4 782 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 GLT8D2Q9H1C3 349 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 EHMT1Q9H9B1 1298 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 CNTNAP5Q8WYK1 1306 aa15.12■□□□□ 0.01
HNRNPC-205ENST00000553300 SPDYE3A6NKU9 549 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 SPATA31C2B4DYI2 1134 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 FIBPO43427 364 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 HOXD8P13378 290 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 RPS6KB1P23443 525 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 CYP2C18P33260 490 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms