RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
DDX54-210ENST00000552375 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 TRPV6Q9H1D0 765 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 DOCK5Q9H7D0 1870 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
DDX54-210ENST00000552375 KPNA6O60684 536 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
DDX54-210ENST00000552375 GH1P01241 217 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 POLR2MP0CAP2 368 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 CSF2RAP15509 400 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 HOXA13P31271 388 aaPredicted RBP16.19■□□□□ 0.18
DDX54-210ENST00000552375 LIFRP42702 1097 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 ARHGAP1Q07960 439 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 ZNF697Q5TEC3 545 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 PSRC1Q6PGN9 363 aaPredicted RBP16.19■□□□□ 0.18
DDX54-210ENST00000552375 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.19■□□□□ 0.187e-6■■□□□ 11.5
DDX54-210ENST00000552375 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
DDX54-210ENST00000552375 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 hCG_1642624A0A1W2PR95 340 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 GOLGA8AA7E2F4 631 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 GOLGA8BA8MQT2 603 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 MMP3P08254 477 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 CYP2C18P33260 490 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 APOBRQ0VD83 1088 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 LY6KQ17RY6 165 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 TMTC2Q8N394 836 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 IL31RAQ8NI17 732 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 AFG1LQ8WV93 481 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
DDX54-210ENST00000552375 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
DDX54-210ENST00000552375 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 SCN10AQ9Y5Y9 1956 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 FRMPD4Q14CM0 1322 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 UMODL1Q5DID0 1318 aa16.18■□□□□ 0.18
DDX54-210ENST00000552375 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 RPS6KB1P23443 525 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 GNAQP50148 359 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 PGM5Q15124 567 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 NBPF20Q3BBV1 942 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 FAM47CQ5HY64 1035 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 SYNE3Q6ZMZ3 975 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 SGMS1Q86VZ5 419 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 BRF1Q92994 677 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
DDX54-210ENST00000552375 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
DDX54-210ENST00000552375 WNT8AQ9H1J5 351 aa16.17■□□□□ 0.18
DDX54-210ENST00000552375 SEC63Q9UGP8 760 aaKnown RBP16.17■□□□□ 0.18
DDX54-210ENST00000552375 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
DDX54-210ENST00000552375 TMEM265A0A087WTH1 108 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 ZBTB43O43298 467 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 RGS20O76081 388 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 SEC24BO95487 1268 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
DDX54-210ENST00000552375 CALM1P0DP23 149 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 CALM2P0DP24 149 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 CALM3P0DP25 149 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 CCND2P30279 289 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
DDX54-210ENST00000552375 RASIP1Q5U651 963 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 SRBD1Q8N5C6 995 aaKnown RBP16.16■□□□□ 0.18
DDX54-210ENST00000552375 IL23AQ9NPF7 189 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 CNTNAP5Q8WYK1 1306 aa16.16■□□□□ 0.18
DDX54-210ENST00000552375 ACRP10323 421 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 CYP2C9P11712 490 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
DDX54-210ENST00000552375 PSMA5P28066 241 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 CCL23P55773 120 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 RTN1Q16799 776 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 TMTC3Q6ZXV5 915 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 FCHSD1Q86WN1 690 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 FAM161BQ96MY7 647 aa16.15■□□□□ 0.18
DDX54-210ENST00000552375 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
DDX54-210ENST00000552375 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
DDX54-210ENST00000552375 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
DDX54-210ENST00000552375 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 DGKDQ16760 1214 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 KAT2BQ92831 832 aa16.14■□□□□ 0.17
DDX54-210ENST00000552375 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
DDX54-210ENST00000552375 TTYH1Q9H313 450 aaPredicted RBP16.14■□□□□ 0.17
DDX54-210ENST00000552375 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.13■□□□□ 0.17
DDX54-210ENST00000552375 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.13■□□□□ 0.17
DDX54-210ENST00000552375 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms