RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TSPAN15O95858 294 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 IMPDH2P12268 514 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 SDSP20132 328 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 CFPP27918 469 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 TSHZ3Q63HK5 1081 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
VPS29-210ENST00000552130 KIAA1958Q8N8K9 716 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 PARD3BQ8TEW8 1205 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
VPS29-210ENST00000552130 ISL2Q96A47 359 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 PRDM7Q9NQW5 492 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 ISY1Q9ULR0 285 aaKnown RBP7.53□□□□□ -1.2
VPS29-210ENST00000552130 TRAK1Q9UPV9 953 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 CTNND2Q9UQB3 1225 aa7.53□□□□□ -1.2
VPS29-210ENST00000552130 FRMPD2Q68DX3 1309 aaPredicted RBP7.52□□□□□ -1.2
VPS29-210ENST00000552130 C9IYK1 514 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 F5H423 210 aaPredicted RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 IGF2BP3O00425 579 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS29-210ENST00000552130 SETSIPP0DME0 302 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 L1CAMP32004 1257 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 ZNF157P51786 506 aaPredicted RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 GTF2A2P52657 109 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 FCGRTP55899 365 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 TBX2Q13207 712 aaPredicted RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 SLC9A5Q14940 896 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 DHCR24Q15392 516 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 ZC3H12AQ5D1E8 599 aaKnown RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 SPECC1Q5M775 1068 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 GPR158Q5T848 1215 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 MZT2BQ6NZ67 158 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 RSRC2Q7L4I2 434 aaKnown RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 SRLQ86TD4 932 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 FTSJ3Q8IY81 847 aaKnown RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 AHI1Q8N157 1196 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 RBBP8NLQ8NC74 664 aaPredicted RBP7.52□□□□□ -1.21
VPS29-210ENST00000552130 COG1Q8WTW3 980 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 CLIP3Q96DZ5 547 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 TBATAQ96M53 351 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 MAN1C1Q9NR34 630 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
VPS29-210ENST00000552130 A6NCN8 305 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 RNGTTO60942 597 aaKnown RBP7.51□□□□□ -1.21
VPS29-210ENST00000552130 SLC5A1P13866 664 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
VPS29-210ENST00000552130 TMPRSS15P98073 1019 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 GALEQ14376 348 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 TAF11Q15544 211 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 PTPN21Q16825 1174 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 ARHGAP29Q52LW3 1261 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 FOXB2Q5VYV0 432 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 FAM186BQ8IYM0 893 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 RNF214Q8ND24 703 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 KISS1RQ969F8 398 aaPredicted RBP7.51□□□□□ -1.21
VPS29-210ENST00000552130 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS29-210ENST00000552130 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS29-210ENST00000552130 ZBTB21Q9ULJ3 1066 aa7.51□□□□□ -1.21
VPS29-210ENST00000552130 PNMA8BQ9ULN7 279 aaPredicted RBP7.51□□□□□ -1.21
VPS29-210ENST00000552130 IQCA1LA6NCM1 817 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ERC2O15083 957 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 F13A1P00488 732 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 SCP2P22307 547 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ECE1P42892 770 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ERVK-24P63145 666 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ZBED6P86452 979 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 MLANAQ16655 118 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
VPS29-210ENST00000552130 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 GK5Q6ZS86 529 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ARHGAP27Q6ZUM4 889 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 SKAP1Q86WV1 359 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 OR8H2Q8N162 312 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
VPS29-210ENST00000552130 MSL3Q8N5Y2 521 aaKnown RBP7.5□□□□□ -1.21
VPS29-210ENST00000552130 POF1BQ8WVV4 589 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 ASB11Q8WXH4 323 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 EXOC2Q96KP1 924 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 EIF2AK1Q9BQI3 630 aaKnown RBP7.5□□□□□ -1.21
VPS29-210ENST00000552130 DHRS4Q9BTZ2 278 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 TCF7L1Q9HCS4 588 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 DDX20Q9UHI6 824 aaKnown RBP7.5□□□□□ -1.21
VPS29-210ENST00000552130 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
VPS29-210ENST00000552130 A0A1W2PQH9 124 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 J3KRW8 73 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 MTA2O94776 668 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 NPTXRO95502 500 aa7.49□□□□□ -1.21
VPS29-210ENST00000552130 KRT1P04264 644 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms