RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ZNF496Q96IT1 587 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SLC6A18Q96N87 628 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 DPH2Q9BQC3 489 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 BRIP1Q9BX63 1249 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ACSS3Q9H6R3 686 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 PRDM10Q9NQV6 1147 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SUCOQ9UBS9 1254 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 PGAP2Q9UHJ9 254 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 PCDHB10Q9UN67 800 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 DAGLAQ9Y4D2 1042 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 NPC1L1Q9UHC9 1359 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SBF1O95248 1867 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 N4BP2Q86UW6 1770 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PRAMEF22A3QJZ6 481 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 FAM181BA6NEQ2 426 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 RASSF10A6NK89 507 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ENPP3O14638 875 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SUSD5O60279 629 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 DDNO94850 711 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 TP53P04637 393 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SERPINB2P05120 415 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 NFICP08651 508 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 CYP7A1P22680 504 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 NOS3P29474 1203 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ETV3P41162 512 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PREPP48147 710 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PMS1P54277 932 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SSRP1Q08945 709 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ADGRE1Q14246 886 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 TCEAL1Q15170 157 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 NFKBIBQ15653 356 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SV2CQ496J9 727 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 AMOTQ4VCS5 1084 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 TAF7LQ5H9L4 462 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 HEATR6Q6AI08 1181 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 OLFM4Q6UX06 510 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ARMCX6Q7L4S7 300 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 HOMER1Q86YM7 354 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 TMEM192Q8IY95 271 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 LILRB2Q8N423 598 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SMC1BQ8NDV3 1235 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 THAP3Q8WTV1 239 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 FBLIM1Q8WUP2 373 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 UTP4Q969X6 686 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PHACTR3Q96KR7 559 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 RNPC3Q96LT9 517 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 UBL7Q96S82 380 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 APBA2Q99767 749 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 MIPEPQ99797 713 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 MKRN2Q9H000 416 aaKnown RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SLKQ9H2G2 1235 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 KCNF1Q9H3M0 494 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 SEMA6CQ9H3T2 930 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 TAF1DQ9H5J8 278 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PANK3Q9H999 370 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 RNF181Q9P0P0 153 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 PFDN2Q9UHV9 154 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF214Q9UL59 606 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.18□□□□□ -1.9
CPSF6-207ENST00000551516 CEP131Q9UPN4 1083 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 USP16Q9Y5T5 823 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ARFGEF1Q9Y6D6 1849 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF541Q9H0D2 1346 aa3.18□□□□□ -1.9
CPSF6-207ENST00000551516 COL15A1P39059 1388 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 LTBP1Q14766 1721 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 FAM95CA0A1B0GW59 222 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ANKRD34BA5PLL1 514 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 CDC45O75419 566 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 UBOX5O94941 541 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 HSPA8P11142 646 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 BMP3P12645 472 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 HSP90B1P14625 803 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 MAP4P27816 1152 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 HOXA10P31260 410 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 RFC4P35249 363 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 MTHFSP49914 203 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 RNF4P78317 190 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 PLEKHO1Q53GL0 409 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ANKRD39Q53RE8 183 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 SGO2Q562F6 1265 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 C2orf27AQ580R0 203 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 RNF187Q5TA31 235 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 TDRD10Q5VZ19 366 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 SULT6B1Q6IMI4 303 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 MRM1Q6IN84 353 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 STYK1Q6J9G0 422 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 LETMD1Q6P1Q0 360 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF530Q6P9A1 599 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 PAOXQ6QHF9 649 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 Q6ZS46 218 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 SPATC1Q76KD6 591 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 UBE3DQ7Z6J8 389 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 ADAT2Q7Z6V5 191 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 CDH24Q86UP0 819 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 TXNRD3Q86VQ6 643 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 LRRC47Q8N1G4 583 aaKnown RBP3.17□□□□□ -1.9
CPSF6-207ENST00000551516 TTLL6Q8N841 843 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 KLHL6Q8WZ60 621 aa3.17□□□□□ -1.9
CPSF6-207ENST00000551516 EZH1Q92800 747 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms