RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TSPAN18Q96SJ8 248 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 CRACR2AQ9BSW2 395 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 OSBPL7Q9BZF2 842 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 GGNBP2Q9H3C7 697 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 NDST4Q9H3R1 872 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 C19orf44Q9H6X5 657 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 ZFATQ9P243 1243 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PUF60Q9UHX1 559 aaKnown RBP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 MYO6Q9UM54 1294 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PCDHA7Q9UN72 937 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 HPSEQ9Y251 543 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 A0A1W2PP64 1363 aa5.92□□□□□ -1.46
LSM3P2-201ENST00000551246 PXDNLA1KZ92 1463 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 N4BP2Q86UW6 1770 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 PNMA6EA0A0J9YXQ4 647 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 NDUFAB1O14561 156 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC27A2O14975 620 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 KIF5CO60282 957 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 YEATS4O95619 227 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ATP6V1G2O95670 118 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 FAM107AO95990 144 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 PENKP01210 267 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 PYGLP06737 847 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 GSTA1P08263 222 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 RHOXF2BP0C7M4 288 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SETSIPP0DME0 302 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 CMA1P23946 247 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ABCD1P33897 745 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 PCBP4P57723 403 aaKnown RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ELF3P78545 371 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ATP2B2Q01814 1243 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MYL5Q02045 173 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 APBA1Q02410 837 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MTX1Q13505 466 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF268Q14587 947 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 NAA25Q14CX7 972 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SPRED3Q2MJR0 410 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SGSM1Q2NKQ1 1148 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 HHATQ5VTY9 493 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC30A9Q6PML9 568 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SLCO4C1Q6ZQN7 724 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 C1orf229Q6ZS94 237 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 TSHZ1Q6ZSZ6 1077 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SYT9Q86SS6 491 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 NLRP14Q86W24 1093 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC35F6Q8N357 371 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MREGQ8N565 214 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 FAM81AQ8TBF8 368 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MYCBPAPQ8TBZ2 947 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 WHAMMQ8TF30 809 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 CUL5Q93034 780 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 RILPL2Q969X0 211 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ARL8AQ96BM9 186 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SPDL1Q96EA4 605 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC51Q96ER9 411 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 DTNBP1Q96EV8 351 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 RSRC1Q96IZ7 334 aaKnown RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF570Q96NI8 536 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 AGAP3Q96P47 875 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SPAG5Q96R06 1193 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 CCT8L2Q96SF2 557 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 NAPGQ99747 312 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 RHOXF2Q9BQY4 288 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 OXCT2Q9BYC2 517 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 AGXT2Q9BYV1 514 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SUDS3Q9H7L9 328 aaPredicted RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 PRDM16Q9HAZ2 1276 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 NOD2Q9HC29 1040 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 FANCLQ9NW38 375 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 FAM184BQ9ULE4 1060 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 SAMM50Q9Y512 469 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 MED23Q9ULK4 1368 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 BCL9O00512 1426 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 CRB1P82279 1406 aa5.91□□□□□ -1.46
LSM3P2-201ENST00000551246 A0A0U1RQJ8 604 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6L7A0A1B0GV03 622 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA6BA6NDN3 693 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 B4DLN1 442 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 JAK2O60674 1132 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 SIN3BO75182 1162 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CTDNEP1O95476 244 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 SLC3A2P08195 630 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 NFKB1P19838 968 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 TARSP26639 723 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 NDUFA8P51970 172 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA8FQ08AF8 430 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GOLGA8DPQ0D2H9 430 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 MTF1Q14872 753 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 KARSQ15046 597 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CDC37Q16543 378 aaPredicted RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC38Q502W7 563 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GLE1Q53GS7 698 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 THEMIS2Q5TEJ8 643 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 NT5DC1Q5TFE4 455 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms