RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 FAM117BQ6P1L5 589 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 ALYREFQ86V81 257 aaKnown RBP12.99□□□□□ -0.33
PFDN5-212ENST00000550880 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 PI4K2BQ8TCG2 481 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
PFDN5-212ENST00000550880 IWS1Q96ST2 819 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 GTF2IRD1Q9UHL9 959 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 NBNO60934 754 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 AMHP03971 560 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 ARHGAP1Q07960 439 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 ALX1Q15699 326 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 DHX37Q8IY37 1157 aaKnown RBP12.98□□□□□ -0.33
PFDN5-212ENST00000550880 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-212ENST00000550880 SAMD11Q96NU1 681 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 CD320Q9NPF0 282 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 HELLSQ9NRZ9 838 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 HDAC6Q9UBN7 1215 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 LCTP09848 1927 aa12.98□□□□□ -0.33
PFDN5-212ENST00000550880 ABCB11O95342 1321 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 LGR5O75473 907 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
PFDN5-212ENST00000550880 MX1P20591 662 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 PSEN2P49810 448 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 LAMC2Q13753 1193 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 MFSD10Q14728 455 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 GPNMBQ14956 572 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 VPS53Q5VIR6 699 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 MIER1Q8N108 512 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 DHX38Q92620 1227 aaKnown RBP12.97□□□□□ -0.33
PFDN5-212ENST00000550880 KAT2BQ92831 832 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 MRPL38Q96DV4 380 aaKnown RBP12.97□□□□□ -0.33
PFDN5-212ENST00000550880 CTAGE1Q96RT6 745 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
PFDN5-212ENST00000550880 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 FOXP2O15409 715 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.33
PFDN5-212ENST00000550880 FGAP02671 866 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 IL9P15248 144 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 KIAA0753Q2KHM9 967 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 TIGD5Q53EQ6 642 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 PPTC7Q8NI37 304 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-212ENST00000550880 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-212ENST00000550880 TAAR1Q96RJ0 339 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 KCNH6Q9H252 994 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-212ENST00000550880 DDX41Q9UJV9 622 aaKnown RBP12.96□□□□□ -0.33
PFDN5-212ENST00000550880 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.33
PFDN5-212ENST00000550880 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 DCXO43602 365 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
PFDN5-212ENST00000550880 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-212ENST00000550880 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 EP400NLQ6ZTU2 488 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 ESR2Q92731 530 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
PFDN5-212ENST00000550880 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
PFDN5-212ENST00000550880 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
PFDN5-212ENST00000550880 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-212ENST00000550880 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-212ENST00000550880 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 NCK2O43639 380 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 F2P00734 622 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 GOLGA8HP0CJ92 632 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 HSPD1P10809 573 aaKnown RBP12.94□□□□□ -0.34
PFDN5-212ENST00000550880 THPOP40225 353 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 NT5C2P49902 561 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.342e-10■■■■■ 40.7
PFDN5-212ENST00000550880 DGKHQ86XP1 1220 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
PFDN5-212ENST00000550880 H3BQ06 376 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-212ENST00000550880 HAS3O00219 553 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 NR3C2P08235 984 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 EIF2AK2P19525 551 aaKnown RBP12.93□□□□□ -0.34
PFDN5-212ENST00000550880 MRE11P49959 708 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 HAND2P61296 217 aa12.93□□□□□ -0.34
PFDN5-212ENST00000550880 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms