RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 SP2Q02086 613 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 UBE2SQ16763 222 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 PFKFB3Q16875 520 aaPredicted RBP7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 TLK2Q86UE8 772 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 SCFD2Q8WU76 684 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 BCAS3Q9H6U6 928 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 RIC8AQ9NPQ8 531 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 BARHL2Q9NY43 387 aa7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 DDX41Q9UJV9 622 aaKnown RBP7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 LAMA2P24043 3122 aaKnown RBP7.47□□□□□ -1.21
TMEM106C-215ENST00000550552 SMCO2A6NFE2 343 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 A6NJR5 290 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 PFKFB2O60825 505 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 CTDNEP1O95476 244 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SCG2P13521 617 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 CDK7P50613 346 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 NAPAP54920 295 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 ARHGAP1Q07960 439 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SCRN1Q12765 414 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SNX17Q15036 470 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 ME3Q16798 604 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 C1orf53Q5VUE5 145 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 C7orf61Q8IZ16 206 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 PCSK9Q8NBP7 692 aaKnown RBP7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SMARCC2Q8TAQ2 1214 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 CUL5Q93034 780 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 MPHOSPH6Q99547 160 aaKnown RBP7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SLC26A6Q9BXS9 759 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 AP5M1Q9H0R1 490 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 TMEM260Q9NX78 707 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 RTEL1Q9NZ71 1219 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 PCDHA6Q9UN73 950 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 NR2E3Q9Y5X4 410 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 GRIN2DO15399 1336 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
TMEM106C-215ENST00000550552 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 NKRFO15226 690 aaKnown RBP eCLIP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 LARGE1O95461 756 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SYN1P17600 705 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 ITGB5P18084 799 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 CCND2P30279 289 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 CLK2P49760 499 aaKnown RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 RTP1P59025 263 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 PURAQ00577 322 aaKnown RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 TLE2Q04725 743 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 TRIM60Q495X7 471 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 PCNX4Q63HM2 1172 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SH3RF1Q7Z6J0 888 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 NECAB1Q8N987 351 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SLC43A3Q8NBI5 491 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 PGBD1Q96JS3 809 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 AIFM3Q96NN9 605 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 INPP4AQ96PE3 977 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 RNF26Q9BY78 433 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 C22orf23Q9BZE7 217 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 ZMYND12Q9H0C1 365 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SLKQ9H2G2 1235 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 SPC25Q9HBM1 224 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 ZMYND8Q9ULU4 1186 aaPredicted RBP7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 ATP11BQ9Y2G3 1177 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 TELO2Q9Y4R8 837 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 ELP1O95163 1332 aa7.45□□□□□ -1.22
TMEM106C-215ENST00000550552 MCM3APO60318 1980 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 LAMA3Q16787 3333 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 TRIM43BA6NCK2 446 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 hCG_1984214I3L0E3 225 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ARVCFO00192 962 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 EDIL3O43854 480 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 SORBS3O60504 671 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ATP9AO75110 1047 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 GH1P01241 217 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ATXN8OSP0DMR3 200 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 TGFB3P10600 412 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 FDPSP14324 419 aaKnown RBP7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ITGB8P26012 769 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ICAM3P32942 547 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ADCY7P51828 1080 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 PSMC6P62333 389 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 SSRP1Q08945 709 aaKnown RBP7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 FAAP100Q0VG06 881 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ST3GAL1Q11201 340 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ANKRD1Q15327 319 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 JAKMIP3Q5VZ66 844 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ANKRD33Q7Z3H0 272 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 ZNF713Q8N859 430 aaPredicted RBP7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 OR6J1Q8NGC5 347 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 CYP2W1Q8TAV3 490 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 PPP1R13LQ8WUF5 828 aa7.44□□□□□ -1.22
TMEM106C-215ENST00000550552 AFG1LQ8WV93 481 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms