RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 FAM184BQ9ULE4 1060 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 COL14A1Q05707 1796 aaKnown RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 SHOX2O60902 331 aaPredicted RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 TACC1O75410 805 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 EIF4A3P38919 411 aaKnown RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 MAGEA9P43362 315 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 KIF11P52732 1056 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 CORO7P57737 925 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 RPS8P62241 208 aaKnown RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 SLC7A5Q01650 507 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 VWA3BQ502W6 1294 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 NFRKBQ6P4R8 1299 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 SPATA4Q8NEY3 305 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 ZMYND12Q9H0C1 365 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 FAM207AQ9NSI2 230 aaPredicted RBP11.42□□□□□ -0.58
ERBB3-214ENST00000550070 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 PNMA2Q9UL42 364 aa11.42□□□□□ -0.58
ERBB3-214ENST00000550070 WNK3Q9BYP7 1800 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 CXCR5P32302 372 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
ERBB3-214ENST00000550070 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 AMOTL1Q8IY63 956 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 FAM76AQ8TAV0 307 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 SH3RF3Q8TEJ3 882 aaPredicted RBP11.41□□□□□ -0.58
ERBB3-214ENST00000550070 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 PSMB7Q99436 277 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 NDST4Q9H3R1 872 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 SALL4Q9UJQ4 1053 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 STX8Q9UNK0 236 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 MAST2Q6P0Q8 1798 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 KLRF2D3W0D1 207 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 LCA5LO95447 670 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 PRLRP16471 622 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 NAPAP54920 295 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 KCNQ4P56696 695 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 NONOQ15233 471 aaKnown RBP eCLIP11.41□□□□□ -0.58
ERBB3-214ENST00000550070 COBLL1Q53SF7 1204 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 CNNM4Q6P4Q7 775 aa11.41□□□□□ -0.58
ERBB3-214ENST00000550070 DZIP1Q86YF9 867 aaKnown RBP11.41□□□□□ -0.58
ERBB3-214ENST00000550070 SMCO2A6NFE2 343 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 NCK2O43639 380 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 PPP1R2P41236 205 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 NOP2P46087 812 aaKnown RBP11.4□□□□□ -0.58
ERBB3-214ENST00000550070 AMPD3Q01432 767 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 ITIH3Q06033 890 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 CCDC70Q6NSX1 233 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 MARCH10Q8NA82 808 aaPredicted RBP11.4□□□□□ -0.58
ERBB3-214ENST00000550070 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 MYMKA6NI61 221 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 LRRC53A6NM62 1247 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 IRAK1P51617 712 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 GRB10Q13322 594 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 DDB1Q16531 1140 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 SLC10A5Q5PT55 438 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 TBC1D9BQ66K14 1250 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 NEK8Q86SG6 692 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 POTEDQ86YR6 584 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
ERBB3-214ENST00000550070 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 EHD4Q9H223 541 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 BLOC1S4Q9NUP1 217 aa11.4□□□□□ -0.58
ERBB3-214ENST00000550070 AKR1B10O60218 316 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 ZRSR2Q15696 482 aaKnown RBP11.39□□□□□ -0.59
ERBB3-214ENST00000550070 DNAJC21Q5F1R6 531 aaKnown RBP11.39□□□□□ -0.59
ERBB3-214ENST00000550070 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 ANKRD13CQ8N6S4 541 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
ERBB3-214ENST00000550070 TBCKQ8TEA7 893 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 IQCDQ96DY2 449 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 HYOU1Q9Y4L1 999 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 ROBO3Q96MS0 1386 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 RASA1P20936 1047 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 TXKP42681 527 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 DIXDC1Q155Q3 683 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 GRIK5Q16478 980 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 MAN2A1Q16706 1144 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 SV2BQ7L1I2 683 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 BAP1Q92560 729 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 CALML4Q96GE6 196 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 BIN2Q9UBW5 565 aaPredicted RBP11.39□□□□□ -0.59
ERBB3-214ENST00000550070 FRMD4BQ9Y2L6 1034 aa11.39□□□□□ -0.59
ERBB3-214ENST00000550070 TCP1P17987 556 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms