RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 CNNM2Q9H8M5 875 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 ATP10DQ9P241 1426 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 CRYBG1Q9Y4K1 1723 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 SSH2Q76I76 1423 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 DIAPH1O60610 1272 aaKnown RBP9.09□□□□□ -0.95
CHPT1-203ENST00000546873 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-203ENST00000546873 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
CHPT1-203ENST00000546873 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.958e-7■■□□□ 14.1
CHPT1-203ENST00000546873 CLCQ05315 142 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 NBPF12Q5TAG4 269 aaPredicted RBP9.09□□□□□ -0.95
CHPT1-203ENST00000546873 RNF111Q6ZNA4 994 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 ANKS4BQ8N8V4 417 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 DAGLBQ8NCG7 672 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 VWCEQ96DN2 955 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 ATG4CQ96DT6 458 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 STK32BQ9NY57 414 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 MAP3K5Q99683 1374 aa9.09□□□□□ -0.95
CHPT1-203ENST00000546873 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 TSPAN15O95858 294 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 PCBP3P57721 371 aaKnown RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 NBPF9Q3BBW0 867 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 SLITRK4Q8IW52 837 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 ZNF655Q8N720 491 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 ZNF526Q8TF50 670 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 TOX2Q96NM4 488 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 SLC6A17Q9H1V8 727 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 METTL5Q9NRN9 209 aaKnown RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
CHPT1-203ENST00000546873 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 PEAK1Q9H792 1746 aa9.08□□□□□ -0.96
CHPT1-203ENST00000546873 PPM1GO15355 546 aaPredicted RBP9.07□□□□□ -0.96
CHPT1-203ENST00000546873 RPL10P27635 214 aaKnown RBP9.07□□□□□ -0.96
CHPT1-203ENST00000546873 POLR2BP30876 1174 aaKnown RBP9.07□□□□□ -0.96
CHPT1-203ENST00000546873 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
CHPT1-203ENST00000546873 EVA1CP58658 441 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 TEKQ02763 1124 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 NR0B2Q15466 257 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 ERICH6BQ5W0A0 696 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 NLGN2Q8NFZ4 835 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 KRTAP9-9Q9BYP9 154 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 KRTAP9-4Q9BYQ2 154 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 RNF32Q9H0A6 362 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 CWC22Q9HCG8 908 aaKnown RBP9.07□□□□□ -0.96
CHPT1-203ENST00000546873 ZMYM5Q9UJ78 669 aa9.07□□□□□ -0.96
CHPT1-203ENST00000546873 OVOS2A0A0G2JMS6 1433 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 IMPDH2P12268 514 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 SNX17Q15036 470 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 TXNRD1Q16881 649 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 HDAC8Q9BY41 377 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 BACH2Q9BYV9 841 aa9.06□□□□□ -0.96
CHPT1-203ENST00000546873 MKRN2Q9H000 416 aaKnown RBP9.06□□□□□ -0.96
CHPT1-203ENST00000546873 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 FLT4P35916 1363 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 KIF24Q5T7B8 1368 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 E9PSI1 815 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 APAF1O14727 1248 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 NME1P15531 152 aaKnown RBP9.05□□□□□ -0.96
CHPT1-203ENST00000546873 PRELPP51888 382 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 ZSCAN18Q8TBC5 510 aaPredicted RBP9.05□□□□□ -0.96
CHPT1-203ENST00000546873 TCTN2Q96GX1 697 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 DHRS1Q96LJ7 313 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 GPR160Q9UJ42 338 aa9.05□□□□□ -0.96
CHPT1-203ENST00000546873 ARID1BQ8NFD5 2236 aaPredicted RBP9.04□□□□□ -0.96
CHPT1-203ENST00000546873 SLC14A2Q15849 920 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 RNF34Q969K3 372 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
CHPT1-203ENST00000546873 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 FOXP3Q9BZS1 431 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 POLKQ9UBT6 870 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 RCAN3Q9UKA8 241 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 FBXL21Q9UKT6 434 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 TCFL5Q9UL49 500 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 PHRF1Q9P1Y6 1649 aaKnown RBP9.04□□□□□ -0.96
CHPT1-203ENST00000546873 ZNF521Q96K83 1311 aa9.04□□□□□ -0.96
CHPT1-203ENST00000546873 PARP4Q9UKK3 1724 aaKnown RBP9.03□□□□□ -0.96
CHPT1-203ENST00000546873 MEIS3P2A8K0S8 358 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 TNFRSF10CO14798 259 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 SYPP08247 313 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 ENDOUP21128 410 aaKnown RBP9.03□□□□□ -0.96
CHPT1-203ENST00000546873 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-203ENST00000546873 LINC00116Q8NCU8 138 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 KCNN1Q92952 543 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 ZNF512BQ96KM6 892 aaPredicted RBP9.03□□□□□ -0.96
CHPT1-203ENST00000546873 MYH16Q9H6N6 1097 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
CHPT1-203ENST00000546873 LRRC37A3O60309 1634 aa9.02□□□□□ -0.96
CHPT1-203ENST00000546873 LTN1O94822 1766 aa9.02□□□□□ -0.97
CHPT1-203ENST00000546873 TCAF2A6NFQ2 919 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms