RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 RNF34Q969K3 372 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 NAT10Q9H0A0 1025 aaKnown RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GBP3Q9H0R5 595 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 TSPAN10Q9H1Z9 355 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GREM2Q9H772 168 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ZNF358Q9NW07 568 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ANO10Q9NW15 660 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GOLIM4O00461 696 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ARHGAP33O14559 1287 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ZSCAN12O43309 604 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ERLIN1O75477 346 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 HOXB1P14653 301 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 IL1R1P14778 569 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GJB2P29033 226 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 TXLNAP40222 546 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 SETQ01105 290 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 TRIM32Q13049 653 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 SHHQ15465 462 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ZKSCAN8Q15776 578 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 FAM26DQ5JW98 314 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 VARS2Q5ST30 1063 aaKnown RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 RUFY3Q7L099 469 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ALYREFQ86V81 257 aaKnown RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 MICALL1Q8N3F8 863 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 LRRN4CLQ8ND94 238 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 TTLL11Q8NHH1 800 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GOLGA1Q92805 767 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 RBCK1Q9BYM8 510 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 DNAJC25Q9H1X3 360 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 ZSWIM4Q9H7M6 989 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 VIPAS39Q9H9C1 493 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 TRMT1Q9NXH9 659 aaKnown RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 DBF4Q9UBU7 674 aaPredicted RBP5.2□□□□□ -1.58
CNGA1-209ENST00000544810 SERTAD1Q9UHV2 236 aa5.2□□□□□ -1.58
CNGA1-209ENST00000544810 GOLGA6L4A6NEF3 574 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 H3BQF6 201 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ZBTB39O15060 712 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ERLIN2O94905 339 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SEC31AO94979 1220 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 FAM13AO94988 1023 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 GNAI3P08754 354 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SFPQP23246 707 aaKnown RBP eCLIP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 INPP5BP32019 993 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ZNF76P36508 570 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SSR1P43307 286 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 AK2P54819 239 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 FOXD4L6Q3SYB3 417 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 C9orf50Q5SZB4 431 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 LRRC31Q6UY01 552 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 FOXD4L3Q6VB84 417 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 MSANTD4Q8NCY6 345 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 COA7Q96BR5 231 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 HOOK2Q96ED9 719 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 MYD88Q99836 296 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ALDH8A1Q9H2A2 487 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 GNL3LQ9NVN8 582 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 HYPKQ9NX55 129 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 CWC25Q9NXE8 425 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 THEGQ9P2T0 379 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 JAG2Q9Y219 1238 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 MRFAP1Q9Y605 127 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 BECN2A8MW95 431 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 FZD6O60353 706 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 IGHMBP2P38935 993 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 USP4Q13107 963 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 NEDD9Q14511 834 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 TWISTNBQ3B726 338 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 BEND6Q5SZJ8 279 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 DCAF15Q66K64 600 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ATL3Q6DD88 541 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 EP400NLQ6ZTU2 488 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SPATS2Q86XZ4 545 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 DHX40Q8IX18 779 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ARMC2Q8NEN0 867 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 LEO1Q8WVC0 666 aaPredicted RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 BAP1Q92560 729 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 GPATCH3Q96I76 525 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SPSB2Q99619 263 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 LRFN3Q9BTN0 628 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 CARD6Q9BX69 1037 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 PARD6BQ9BYG5 372 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 ZNF341Q9BYN7 854 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 UPF3BQ9BZI7 483 aaKnown RBP5.19□□□□□ -1.58
CNGA1-209ENST00000544810 PRKD2Q9BZL6 878 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 NIF3L1Q9GZT8 377 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 PDRG1Q9NUG6 133 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 SNX14Q9Y5W7 946 aa5.19□□□□□ -1.58
CNGA1-209ENST00000544810 A6NNZ2 444 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CXCL11O14625 94 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 SHOX2O60902 331 aaPredicted RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 DXOO77932 396 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 HNRNPH1P31943 449 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CRKP46108 304 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 MRPS5P82675 430 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 PLCB3Q01970 1234 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 ARID5BQ14865 1188 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 GRIN2CQ14957 1233 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 TUBB8Q3ZCM7 444 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms